Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01756 ATGGCGGTTCTGAACGCTTTCTCTCTTTCCTTCTTCTTCTTGGTTTTCGTCACTTTTGTTGTTTCCATTTCCAGTGAGCCTCTTCCCCAACCTGTGGTTTCTTCCACTGATGTTGAACTCCTATTGTTCAAAATCAAGTCTTCACTCCAGGGAAACACCAATGGAGAAGAAAACCTTGTCTTATCTTCATGGAACTCTTCAGTTCCACTATGTCAATGGAGAGGTCTCAAATGGATCTTCTCCAGCGGCACACCTTTGTCATGCACTGATCTCTCATCACCACAATGGACCAATCTCTCACTCCACAAAGACCCTTCTCTTCACTTACAATCCCTTCAGCTTCCTTCTGCAAATCTCTCTGGTTCTCTCCCCAGAGAGCTTGGTGAGTTTCCATTGCTTCAAAGCCTCTACCTTAACATTAACTCCTTGAAAGGAACGGTTCCTCTTGAAATTGGTTACAGTACCTCATTATCTGACATTGATTTTGGTGATAATCTTTTGACTGGGCAGATTCCTGCTTCAATTTGGAATCTTTGTGATAGACTTGTTTCTCTTAGGGTTCATGGAAACTCCTTCTCTGGGAATGTTCCAGAACCTGCATTGCCTAACTCTTCTTCTTGTAAGAGTCTTCAGTTTCTTGATTTGGGTGATAACAGATTCTCTGGGGAGTTTCCTGAGTTTGTTACTAAGTTTGGTGGGTTGAAGCAGCTTGATTTAGGGAACAATATGTTTGTTGGTTCAATTCCTCAGAGCTTAGTTGGGCTAAAGCTTGAAAAATTGAACCTTTCTCATAATAACTTCAGCGGGGTTTTGCCAGTTTTTGGGCAGAACAAATTTGGGGTTGATGTGTTTGAAGGGAATAGTCCTGACTTGTGTGGACCACCTTTGAGAAGTTGCACCAGGAACTCTGCACTGAGTTCTGGTGCAGTTGCTGGCATAGTTATTAGTCTTATGACTAGTGCAGTTGTTTTGGCTTCTTTGTTGATTGGTTATATGCAGAACAAGAAGAGGAAGGGTAGCGGAGAGAGTGAAGATGAGTTGAATGACGAAGAGGAAGATGATGAGAATGGTGGTGGTGGTGGGGCTGGTGATGGTGATGGGGGGGAAGGGAAGCTTATGATATTCAGCGGCGGCGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGACAAGTCATGGAGAAGACATGTTATGGGACTGCTTATAAGGCGAAGCTTGCTGATGGGAGCACCATTGCTTTGAGGTTGTTGAGGGAAGGTAGCTGCAAGGATAGGAACTCATGCTTGCCGGTTATAAAGCAGTTGGGCAAGATTCGACATGAGAACTTGATTCCTTTGANGCTCCTTATTTATGACTATTTTCCTCTTAGAACCCTTCATGAGCTTCTTCATGAAACTAAAGCAGGAAAACCAGTGCTTAACTGGGCTAGGCGACACAAGATCGCATTGGGAATAGCGAGAGGGCTGGCCTATCTTCATACAGGACTTGATGTACCGATCACTCATGCGAATGTAAGATCCAAAAATGTGCTAGTGGACGACTTCTTTGTTGCGAGGGTCACTGACTTTGGCCTTGATAAGCTGATGGTTCCTTCCATAGCCGACGAAATGGTAGCACTTGCTCGGGCAGACGGCTACAAGGCTCCGGAACTTCAAAAAATGAAGAAATGCAATTCCAGGACTGATGTTTATGCATTTGGTATACTGCTGCTGGAGATTTTGATTGGGAAGAAGCCAGGGAAAAACGGAAGAAACGGAGAGTTTGTTGACTTGCCTGCGATGGTGAAAGTGGCGGTTTTGGAAGAGACAACAATGGAAGTGTTCGATGTGGAGCTCTTGAAAGGAATAAGAAGTCCAATGGAAGATGGCATGGTGCAGGCACTGAAGCTGGCGATGGGATGCTGCGCACCGGTGGCGGCAGTTAGGCCGAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGGAACAGGTCTGCATTGTACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACCCCGTTTTGA 2037 0.4507 MAVLNAFSLSFFFLVFVTFVVSISSEPLPQPVVSSTDVELLLFKIKSSLQGNTNGEENLVLSSWNSSVPLCQWRGLKWIFSSGTPLSCTDLSSPQWTNLSLHKDPSLHLQSLQLPSANLSGSLPRELGEFPLLQSLYLNINSLKGTVPLEIGYSTSLSDIDFGDNLLTGQIPASIWNLCDRLVSLRVHGNSFSGNVPEPALPNSSSCKSLQFLDLGDNRFSGEFPEFVTKFGGLKQLDLGNNMFVGSIPQSLVGLKLEKLNLSHNNFSGVLPVFGQNKFGVDVFEGNSPDLCGPPLRSCTRNSALSSGAVAGIVISLMTSAVVLASLLIGYMQNKKRKGSGESEDELNDEEEDDENGGGGGAGDGDGGEGKLMIFSGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGSTIALRLLREGSCKDRNSCLPVIKQLGKIRHENLIPLXLLIYDYFPLRTLHELLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARVTDFGLDKLMVPSIADEMVALARADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGEFVDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVAAVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01756 678 ProSiteProfiles Protein kinase domain profile. 388 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01756 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 678 - -
Aip04g01756 678 Gene3D Ribonuclease Inhibitor 205 303 IPR032675 -
Aip04g01756 678 Gene3D Transferase(Phosphotransferase) domain 1 457 666 - -
Aip04g01756 678 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Aip04g01756 678 SUPERFAMILY Protein kinase-like (PK-like) 397 654 IPR011009 -
Aip04g01756 678 MobiDBLite consensus disorder prediction 338 373 - -
Aip04g01756 678 Gene3D Ribonuclease Inhibitor 37 203 IPR032675 -
Aip04g01756 678 SUPERFAMILY L domain-like 74 274 - -
Aip04g01756 678 MobiDBLite consensus disorder prediction 659 678 - -
Aip04g01756 678 MobiDBLite consensus disorder prediction 345 359 - -
Aip04g01756 678 Pfam Protein tyrosine and serine/threonine kinase 399 653 IPR001245 GO:0004672|GO:0006468
Aip04g01756 678 Gene3D Phosphorylase Kinase; domain 1 378 454 - -
Aip04g01756 678 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 7 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01756 Aip-Chr4 70312108 70315103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01756 13 678 Receptor kinase-like Gene Family AT3G24660 69.276 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip04g01756 PK_Tyr_Ser-Thr 1.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01756 - - gmx:100814814 1043.11