Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01754 ATGGTTGATTGTGCTTATGCATTCGCCTTGGGCATGTTCATGCTTATGAACGATCCCACTGAGAATCAAGATGCTATAGATGCCGCAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCAAGAGCTGGAATCAGGGAGGTCTATTTTTTCCCTTTCAATTCTGTAGACAAGAGGACTGCTCTAACTTACATTGATTCTGATGAAAATTGGCATAGACCCAGCAAAAGTGCTCCTGATGCGGCAGTGATTACAGCATATTTGATGAGAACGAAAAATCTCTCTCTCGAAGATTTCCTTGAATCATTAAGGAAGAGCTATGAATTTGTTTGTCCCAATGATGGCTTTCTTGAGCAGTTGAGAATGTTCGAGGAGATGGGCTTCAAGGTTGATCACTCCAGTCCTATATATAAGCGCTTTCATCTGTAA 426 0.4178 MVDCAYAFALGMFMLMNDPTENQDAIDAAIVGMLADPKEARAGIREVYFFPFNSVDKRTALTYIDSDENWHRPSKSAPDAAVITAYLMRTKNLSLEDFLESLRKSYEFVCPNDGFLEQLRMFEEMGFKVDHSSPIYKRFHL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01754 141 PANTHER CALCIUM-TRANSPORTING ATPASE 19 80 - -
Aip04g01754 141 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 19 80 IPR023299 GO:0000166
Aip04g01754 141 Pfam Dual specificity phosphatase, catalytic domain 80 124 IPR000340 GO:0008138|GO:0016311
Aip04g01754 141 PANTHER PLASMA MEMBRANE ATPASE 19 80 - -
Aip04g01754 141 Gene3D - 7 127 IPR023299 GO:0000166
Aip04g01754 141 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 81 126 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01754 Aip-Chr4 70153733 70155881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01754 12 79 Primary Pumps ATPases AT2G18960 77.941 7.18e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01754 K01535 - csv:101221783 113.235