Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01752 ATGCTCCTTTCTGCTCCAACTAATAAGAATGACAATATGGAACCTGTATATCATCTTCCAGTGGAACAGAAAGCAGATGATGATTCATGGGGCCTTGTTATAGAGGCTCTTCTAGCAGGCAGTGGAACTTCATCAGATGAAGCAACCGGCTGCCCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGATTAGGTTATGAGTTGGCGTTAATCCCTATTCTTAATTGTGGTGTGAATATAAATTTTCGTGACATCAGGGGGTGGACTGCCCTTCATTGGGTTGCACAGTTTGGAAGAAATGCTGCTGTGCTGCTGCTCGGATACAGGCTACATTTGTGCTCATTCTTTCAAAAATGGAGGGAGAGGGAAGCAGCAGCTGCTGCTGCAGCTAGTCTAGATAGGTATGATATCGATGCTGATGGCATTGGTAACATTCCAGAGCTTTCTCCTAGGTTAAGTCATAGATTTGGGAGGCTTCGTGATtacaatgtgtaa 504 0.4385 MLLSAPTNKNDNMEPVYHLPVEQKADDDSWGLVIEALLAGSGTSSDEATGCPLSKKEQGIIHMVAGLGYELALIPILNCGVNINFRDIRGWTALHWVAQFGRNAAVLLLGYRLHLCSFFQKWREREAAAAAAASLDRYDIDADGIGNIPELSPRLSHRFGRLRDYNV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01752 167 PANTHER CALMODULIN-BINDING PROTEIN 1 46 - -
Aip04g01752 167 PANTHER CALMODULIN-BINDING PROTEIN 45 106 - -
Aip04g01752 167 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 46 - -
Aip04g01752 167 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 45 106 - -
Aip04g01752 167 Gene3D - 35 132 IPR036770 -
Aip04g01752 167 SUPERFAMILY Ankyrin repeat 58 109 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01752 Aip-Chr4 70046426 70048204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01752 24 109 CAMTA Transcription Factor Family AT1G67310 45.946 7.98e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01752 K21596 - gmx:100786880 143.665