Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01751 ATGATAGGTGATGGTGTCAACGACGCCCCTGCATTAAGGAGAGGAGAAATTGGAATTACTGTTGCTGATGCTACAGACGCTGCTAGAAGTGCTTCTGATATTGTCTTCAGTAAACCTGGTCTTAGTGTCATTATTAGTGCAGTACTCACCAGCAGGGCAATTTTCCATATCTCCCTCCCACCTTCTTGGAAAGAAACAGAAACTGCTAGAAGCCAAGACAAGCTGTTATTACTTGTTACATTTGCACAAATGCTCCTTTCTGCTCCAACTAAAAAGAATGACAACATGGAACCTGTATATCATCTTCTAGTGGAACAGAAAGCAGATGATAATTCATGGAGCCTTGTTATAGAGGCTCTTCTAGTAGGCAGTGGAACTTCATCAGGTACTATTGATTGGCTTCTTGAAGAGCTGCTGAAGGATAGGCTACAGCTGTGGCTTTATGGCAAATCCTGA 456 0.4254 MIGDGVNDAPALRRGEIGITVADATDAARSASDIVFSKPGLSVIISAVLTSRAIFHISLPPSWKETETARSQDKLLLLVTFAQMLLSAPTKKNDNMEPVYHLLVEQKADDNSWSLVIEALLVGSGTSSGTIDWLLEELLKDRLQLWLYGKS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01751 151 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01751 151 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01751 151 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Aip04g01751 151 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Aip04g01751 151 Gene3D - 1 39 IPR023214 -
Aip04g01751 151 PANTHER CALMODULIN-BINDING PROTEIN 65 149 - -
Aip04g01751 151 Gene3D - 40 56 - -
Aip04g01751 151 SUPERFAMILY HAD-like 1 48 IPR036412 -
Aip04g01751 151 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 65 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01751 Aip-Chr4 69969282 69970101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01751 1 56 Primary Pumps ATPases AT1G80660 82.143 1.10e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01751 - - gmx:100786880 108.227