Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01744 atgatgtttgcattgTCATCAGAGACCGAACAAGGGGTTGCATTAGCAATTTTGAGGGCAGTGATTGACTTCAAGAGGGAGCCATGGCCGCAGATATCAGATAGTGCTAAGAGCCTCGTGAGGCAGATGCTGGAGCCTGATCCTAAGAAGCGGTTGACAGCAGAGCAGGTTCTTAAACATTCCTGGCTACAGAATGCAAAGAAAGCTTTAAATGTTCCGTTAGGAGATATTGTGAGGACAAGGCTTAAGCAGTTCTCTGTGATGAATAGATTTAAAAAGAGAGTTCTTCGGACTCTGCAGAGTTGA 306 0.4314 MMFALSSETEQGVALAILRAVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLKHSWLQNAKKALNVPLGDIVRTRLKQFSVMNRFKKRVLRTLQS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01744 101 Pfam Protein kinase domain 16 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01744 101 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 99 - -
Aip04g01744 101 PANTHER BNAA09G44420D PROTEIN 7 99 - -
Aip04g01744 101 SUPERFAMILY Protein kinase-like (PK-like) 7 90 IPR011009 -
Aip04g01744 101 Gene3D Transferase(Phosphotransferase) domain 1 2 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01744 Aip-Chr4 68216439 68218749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01744 7 99 EF-hand Containing Proteins AT1G18890 80.645 7.76e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip04g01744 Pkinase 1.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01744 K13412 - aip:110271514 180.259