Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01743 ATGGCTGAGAAGGTGACTATAATGAAGCTCAAGGTTGACCTTAAATGCCACAAATGCTACAAGAAGGTCAAGAAGGTTCTCGCTAAGTTCCCTCGTCAACATAAACGACAGCACCAGGCCATCCTGTTTATTGGTGAATATAAGGAAGAGGGAATTGTCAGCTTGGGAAATCTCAAGACTTTCACGTTCAGAGAGCTCCAACAGGCAACAGATAGTTTCAGTTCCAAGAACATACTTGGGGCTAGAGGTTTTGGCAATGTTCATAGGGAAAAATTTGCTGGTGACGGCTCTATGGTGGCAGTGAAAAGACTGAAGGATGTCACTGGAAGTTCTGGTGAATCACTGTTTCGAACAGAATTGGAGATGATCAGTTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGAATATTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGGCATCCAGGCTTAG 483 0.4286 MAEKVTIMKLKVDLKCHKCYKKVKKVLAKFPRQHKRQHQAILFIGEYKEEGIVSLGNLKTFTFRELQQATDSFSSKNILGARGFGNVHREKFAGDGSMVAVKRLKDVTGSSGESLFRTELEMISLAVHRNLLRLIEYCATPNEKLLVYPYMSNGSVGIQA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01743 160 SUPERFAMILY Protein kinase-like (PK-like) 53 155 IPR011009 -
Aip04g01743 160 ProSiteProfiles Protein kinase domain profile. 73 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01743 160 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Aip04g01743 160 Pfam Protein tyrosine and serine/threonine kinase 76 156 IPR001245 GO:0004672|GO:0006468
Aip04g01743 160 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 32 157 - -
Aip04g01743 160 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 32 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01743 Aip-Chr4 68214329 68215046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01743 35 156 Receptor kinase-like Gene Family AT2G23950 71.311 9.73e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip04g01743 Pkinase 7.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01743 - - aip:110270670 252.677