Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01742 ATGAGGCGAGGCGAGCTGCGATGGGAACTAAGTTGCGGCCGCGGGAAAGTGGCTTCGGGGAAGAAACTTGCGAATCCAATGAGAGAGATTAAGGTACAGAAGCTCGTTCTCAACATCTCCATGGGTGAGAGTGGAGATCGTCTCACTAGAGCTGCTAAGATAGAAGCCATAAGATTGGGAATTGCTTTGGTGCTTCAAATTGGTTTAGAGGGAGTAATGATAGTGATACTGCTGAGAAACCCCAACAAGGCCTGGATTCTAGGAAACAAGACTGAATCAGTAGAATATTATAGATTTTATCTGAACTCTCCATTTCCCACAAATTTGGTTGACATTACAGAAGAGAGGATAAAAACCACTACTGTCTTGCTTTTCCACTATTGTGAGGAGGCACAATCTTTGAAATGCACAACATGCTGCAACCTCTTTGGCGATGAACAAGTAGAAACTTCCTCAGTTTGCGAGCAGCATGAACTGCCGCTTGAGCGTCGGCACCGGCTCCGTGAGCAAGCGCTCCAATTACTTCAAAGCCTTTTAGGAATCAATGTTCGAAGCTCCTCTGTTTACAAATTTCAAAACGCGAGTCAGAGAAAAGTTGAAGTGAATTTAAGATTTGAAATTGATAGAGAGAGAAGGAAAACCTGA 645 0.4388 MRRGELRWELSCGRGKVASGKKLANPMREIKVQKLVLNISMGESGDRLTRAAKIEAIRLGIALVLQIGLEGVMIVILLRNPNKAWILGNKTESVEYYRFYLNSPFPTNLVDITEERIKTTTVLLFHYCEEAQSLKCTTCCNLFGDEQVETSSVCEQHELPLERRHRLREQALQLLQSLLGINVRSSSVYKFQNASQRKVEVNLRFEIDRERRKT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01742 214 Gene3D - 19 67 IPR022803 -
Aip04g01742 214 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 18 55 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aip04g01742 214 PANTHER 60S RIBOSOMAL PROTEIN L11 18 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01742 Aip-Chr4 68194796 68199062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01742 17 54 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 81.579 4.33e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01742 K02868 - lja:Lj0g3v0238619.1 68.5514