Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01723 ATGGCACCACATTTGGATGAAATAGGGAATCCTGATGCTTTGGGTGCTGAGCTATTGAAAACACTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTCAAAAACTACAATAGTGACCTTTTAAAACCTAGCTCAGCGGAAAGGTTTCTTAAAGCTGTGCTTGATATCTTTTTTGCCTTTAAGAGGGTTAAAGCTATGCTATATAGTGCTAACTTTGATTCAGAAGTCAATTATCTCTGGAAGTCTTTTCAAACCCTGGAAGCAGTAATTGAGCAATTAAGGAACAGCTGGTTATTCCTCAAACTCCTTGAAGTTGTTCTCAGAACAGGAAATAGAATGAATGTTGGCACCAATAGAGGCGATGCCAAAGCTTTCAAACTTGAGACACTCTTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTGGTCCAGGAGATTATTAGATATGAGGATGGAGGCGGGGAATCCGTGAATGGTAGTGTTCAGAACCAAATGGATTTCAAATTTAACGAGGACGAGTTTAAGAAGCAAGGATTACAAGTTGTGGCTGGGCTGAGTAGAGACCTTAGTAATGTTAAGAAAGCAGCAAGAATGGATTCAGATGTCTTAAGCAGCTATGTTTCGAAGCTCGAAACAGGGCTCGATAAAGTGCGACTGGTATTGAAATATGAGAAGCCAGATACGCAGGGAAATTTCTTCTCCACAAAGCAATTTCTGAAATATGCTGAAGAAGAAATCACGAGGATTAAGATCGGGATTGGAGGAGCATTGCTGCCAAAGAGGGATTTGACTCGTTTCGTGAAGTGTCCTAATACCGTACAAACCCAGAGGAAGAAAAGGATCCTCAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACTAG 909 0.407 MAPHLDEIGNPDALGAELLKTLVKMAPTKEEEIKLKNYNSDLLKPSSAERFLKAVLDIFFAFKRVKAMLYSANFDSEVNYLWKSFQTLEAVIEQLRNSWLFLKLLEVVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRYEDGGGESVNGSVQNQMDFKFNEDEFKKQGLQVVAGLSRDLSNVKKAARMDSDVLSSYVSKLETGLDKVRLVLKYEKPDTQGNFFSTKQFLKYAEEEITRIKIGIGGALLPKRDLTRFVKCPNTVQTQRKKRILKQRLKVPPALN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01723 302 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 302 IPR015425 -
Aip04g01723 302 Gene3D Formin, FH2 domain 5 263 IPR042201 -
Aip04g01723 302 SUPERFAMILY Formin homology 2 domain (FH2 domain) 10 260 - -
Aip04g01723 302 Pfam Formin Homology 2 Domain 9 262 IPR015425 -
Aip04g01723 302 SMART it6_source 3 301 IPR015425 -
Aip04g01723 302 PANTHER FORMIN-RELATED 9 281 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip04g01723 302 PANTHER FORMIN-LIKE PROTEIN 9 281 - -
Aip04g01723 302 PRINTS Ribosomal protein L7A family signature 294 302 IPR001921 -
Aip04g01723 302 PRINTS Ribosomal protein L7A family signature 274 291 IPR001921 -
Aip04g01723 302 PRINTS Ribosomal protein L7A family signature 257 274 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01723 Aip-Chr4 66453009 66454736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01723 9 275 FH2 protein (formin) Gene Family AT5G67470 66.418 9.17e-105 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01723 - - gmx:100798670 394.045