Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01720 ATGTCGTTCATCCATCTTCAACGTTCAGCCTCATCTGCTCAAACCCAGCCTTGGCGTCGTTCATCCATCTTCAGCGTTCAGACTCATCTTCTCGAACCATCCTTGGCGTCGTTCATCCATCTTCAGCGTTCAGCCTCATCTTGTCGAACCCAGCCCTGGTCGTGGTGCTGCTTGCCTCTCTGTGTCGCGGTTCTATTCGCCTCTCTCTGTCGCGGTTCTGCTCGCCTCTCTCTCTCTCGCGGTTCTGCTCGCCTCTCATCCCGCATCTGGCATCAAGGTGGTTCACTATTTCTATTTGATCGAACGGTTTTGAGATACTTCAGAAAGGATGGGCATAATTGGAGAAAGAAAAAACATGGAAAAACCGTGAAAGAAGCGCATGAAAAAATGAAGGGGTTGTGGCATTTTTCAATCAAATTTAGGTGGGAAGTATTGACGTGTTACATTGCTACTATGCCCATGGTGAAAAAAATGAAAAATTTCAGAAACGAAGCTATTGGATGCTGGAACCCTACCATGGAAAATAGGCAAGAAAATTTAATTCCCCCATCCTTGCCTAACCAGCAACTGCTGTTCTTCGATGAGGAACTATGGCTGATGGCTGAAGAAAGGGCCCAAGAGATACTATGTACAATTCAACCAAATGTAATTTCTGAGGTGACTAGAAAGGAGATTATTGAATATGTTCGGAGGCTGATTAGAGGTTACTATGGAGCAGAGGTTAGAATATTTTGA 735 0.4503 MSFIHLQRSASSAQTQPWRRSSIFSVQTHLLEPSLASFIHLQRSASSCRTQPWSWCCLPLCVAVLFASLCRGSARLSLSRGSARLSSRIWHQGGSLFLFDRTVLRYFRKDGHNWRKKKHGKTVKEAHEKMKGLWHFSIKFRWEVLTCYIATMPMVKKMKNFRNEAIGCWNPTMENRQENLIPPSLPNQQLLFFDEELWLMAEERAQEILCTIQPNVISEVTRKEIIEYVRRLIRGYYGAEVRIF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01720 244 ProSiteProfiles CG-1 DNA-binding domain profile. 64 205 IPR005559 GO:0003677
Aip04g01720 244 SMART CG_1_2 58 156 IPR005559 GO:0003677
Aip04g01720 244 Pfam CG-1 domain 92 131 IPR005559 GO:0003677
Aip04g01720 244 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 173 244 - -
Aip04g01720 244 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 173 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01720 Aip-Chr4 65678530 65683207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01720 94 150 CAMTA Transcription Factor Family AT5G64220 70.175 5.99e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01720 K21596 - aip:107623369 139.428