Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01711 ATGGAATTGATAGAGAAAGTAGTTGTTTATCCCGAGCAATCCACTCTTAAAAAGCGAATTTTCTTGTCCAATATCGACTTATGTCTTGTTGTTTACCAGGACACTGTCTTCTTCTTTGATCCTCCAACTAGCGAAATGAGTTTTTCTGAAATTTTCAACAAATTATGCAATGCATTTGGTAAATTGCTTGTGCATTATGACTTTATGGCTGGCCGACTTGTGCAAAGTTTGGAGGACAGTCATCGGTTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAACTGATAGAAAGTTGAGTGAATTTGGTGATATTTTTGCACCTAATCAAGATTTAGAGGAATTGGCTATGTTCCTCCAAGGAAAACAGGAAGAAGAAATCGACTTGAAAGAGAAACCCCTTTTATCGGTACAGTTGACGCAATTTGCTTGCGGGAGTTTGGCATTAACTGCTCACTACAATCACTGCACACTAGACGGTTTAGCAGTAAGAGATTTCGGGGCAAACTTGGCTGCATTAACACGTGGTGATTCCCTAATCGTAGTTCCTTTTACAGATAGGACATTGCTAAGAGCAAGAAACCCACCAAGGATTAGTTACCCACATTTTGAGTATGGAAAAGCTACAAACATTGAAAACTTGTTTAGTGTTCGTGGAACAAGTGGTGGCATTAATGTAAGACAAAATGTGACACAAAACCAAATCCAGATTCTTTATTTGTCTCCACAGCAAATTGCCAGCTTTAAAATGAAAGCTATTAAGGATTGTAACTTAAAGAATGTGACTACTTTTCATGTTGTTGCCGGTAAAATATGGAAGGCGAGAACTATTGCGATAAAGATGTCAGATGATCAAGTGTCGACAATGTTGTTTCCTGTGGATATTAGGAAAAGAGTTTCTCCAGAACTTCCATACGGCTTTGCAGGCAAGGATGAAATACATATGAGAATATTTTTAACAAAAAAATGCAATGCTTTGGTTCCTGGATTTGCAAGAGCAACTGTGAAGGAGCTCACAGAATTAGAGGATGCTTATCATATCATAAAAGTACAAGAAGGAATTGAAAGGTTGGATGACGAGTATATTAAGTCAAGCATAGATTGGTTAGAATTGAACAAAGGAGTGCCTCGTAGGGAAGATAGTTTCTCATTGGTTTCAGGGTTGAGATTGGGGATTGGGGACCAACATTTTGCATGGGGTAAACTAAAATGTTCAACACCACTTACTGTTAAGCCAGGTCTAGTCATGCTATTACCAGCAGCACCAGGTGATGGAGGTCTTAATGTCTGTCTGGATTTACTAGAAGATCAAATGTACATATTTCGTAGGATAATGCTGGAATTCTAA 1359 0.3834 MELIEKVVVYPEQSTLKKRIFLSNIDLCLVVYQDTVFFFDPPTSEMSFSEIFNKLCNAFGKLLVHYDFMAGRLVQSLEDSHRFEIDCNDAGIVVIAARTDRKLSEFGDIFAPNQDLEELAMFLQGKQEEEIDLKEKPLLSVQLTQFACGSLALTAHYNHCTLDGLAVRDFGANLAALTRGDSLIVVPFTDRTLLRARNPPRISYPHFEYGKATNIENLFSVRGTSGGINVRQNVTQNQIQILYLSPQQIASFKMKAIKDCNLKNVTTFHVVAGKIWKARTIAIKMSDDQVSTMLFPVDIRKRVSPELPYGFAGKDEIHMRIFLTKKCNALVPGFARATVKELTELEDAYHIIKVQEGIERLDDEYIKSSIDWLELNKGVPRREDSFSLVSGLRLGIGDQHFAWGKLKCSTPLTVKPGLVMLLPAAPGDGGLNVCLDLLEDQMYIFRRIMLEF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01711 452 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 450 - -
Aip04g01711 452 Gene3D - 1 211 IPR023213 -
Aip04g01711 452 Pfam Transferase family 2 446 - -
Aip04g01711 452 Gene3D - 229 452 IPR023213 -
Aip04g01711 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01711 Aip-Chr4 64018613 64021511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01711 5 451 Monolignol Biosynthesis Gene Families AT5G48930 28.070 3.93e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01711 K15400 - gmx:100801822 597.816