Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01684 ATGGCTTTCCGCGTCTCTTGCTCGGTGTCGGAGCTCGGAGGCGGCAACTATTTACTGCGTCTCTTGCTCACTGTCGATGTCGGTCTTACCCTTGTTGAAGGAATAGTTGCTTCGTTGCCTTGTTTCAGGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATTGAGAAGGCGAAGGCATCTGCTGCTAATTCGAATAAGAAGGCGGTGAAGTATGCTCGCAGGGAGGATGCTATTATTCATGCTCTTGAGCTAGAAAGTGCTCGTGTTGGCAAGGAGCCATTAGTTTTTTGCTCTAGAACTGGAATTGAAGCTCGGAGATTCATATTCGGTCCTCCCATAGCATTGGCAATAGGAGCAAGGTTGATACCATTGAGGAAACCAAAGAAGTTACCTAAGTATATTCTGGAGTATGGAAGGGACTGTCTTAAGATGCTTGTTGGAGCAATTGAAGCTGGTGAACGCGCGATAGTGGTTGATGATTTGATTGCAACTGGTGGAATACTCTGTGCTGCTATGGACTTATTGGGGGCCAATATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTGTTGAGCTGGCTATTATTTTGAGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGATTCTTAAATCCTCTTTAGGGTTCATTGAGATGGACCTTGAGAAAAGATATACTTTAAAGGCAGCAATTGTCACTTGTGGAGGGCTTTGCCCTGGCCTTAATGATGTCATCAGACAGCATTGTGCTTTTGTATATGATGGCGGTGTGCTTCCATCAGGTCGAGCAGGTTCAATAGTTGTGGACCTCACTACACCACACAAATACAAGATACTGAGACCTGGAAGAAACTTACAAAAAAAAACTGCATTCAATAGGATCCAGTTGCTGCATCATGCTCTAGGTGTGAGGAATTGTGGTGTTCTTCTCTTCAATGAATCTGAGATACTGGGTTGTGGTGATTGTGGTGCTGCTGCGGTTGTCTAA 1059 0.4466 MAFRVSCSVSELGGGNYLLRLLLTVDVGLTLVEGIVASLPCFRDWYNLEKSKQVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDAIIHALELESARVGKEPLVFCSRTGIEARRFIFGPPIALAIGARLIPLRKPKKLPKYILEYGRDCLKMLVGAIEAGERAIVVDDLIATGGILCAAMDLLGANILVDNKGCIKLADFGASKQVVELAIILSAKSMKGTPYWMAPEILKSSLGFIEMDLEKRYTLKAAIVTCGGLCPGLNDVIRQHCAFVYDGGVLPSGRAGSIVVDLTTPHKYKILRPGRNLQKKTAFNRIQLLHHALGVRNCGVLLFNESEILGCGDCGAAAVV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01684 352 Gene3D - 92 224 IPR029057 -
Aip04g01684 352 Pfam Protein kinase domain 184 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01684 352 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 44 112 - -
Aip04g01684 352 CDD PRTases_typeI 90 187 IPR000836 -
Aip04g01684 352 ProSiteProfiles Protein kinase domain profile. 51 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01684 352 PANTHER T17B22.17 PROTEIN-RELATED 44 112 IPR044679 -
Aip04g01684 352 SUPERFAMILY Phosphofructokinase 249 271 IPR035966 GO:0003872|GO:0006096
Aip04g01684 352 SUPERFAMILY Protein kinase-like (PK-like) 185 236 IPR011009 -
Aip04g01684 352 Gene3D - 249 282 - -
Aip04g01684 352 SUPERFAMILY PRTase-like 113 188 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01684 Aip-Chr4 57904803 57908139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01684 113 221 PRT Gene Family AT1G27450 52.542 1.56e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip04g01684 Pkinase 4.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01684 K00759 - adu:107458529 132.494