Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01670 ATGGCTTTCCGCGTCTCTTGCTCGGTGTTGGAGCTCGGAGGCGGCAACTGTTTTCTACATCTCTTGCTCGGTGTCGATGTCGGTCTTGCCCTTGTTGAAGGAATAGTTGCTTCATTGCGTTGTTTCAGGGACTGGTATAACCTTGAGAAGTTGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCGAAGGCATCTGCTGCTAATTCGAATAAGAAGGCGGTGAAGTATGCTCGCAGGGAGGATGCTAGTtctggaaATGGTGAAGAAATTATAGGCCTTCAATATTTTCAATCTAGAGGAATGAACGNGCTTGCTACAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTAGGCATAGCATTCTTTTCTTCCTCTTTCACACCCTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTACAAAGTGAGATTGGGATTCTAGCTGATGGCACCTTAGCTCTGAGACAAGTTCTAATTCTGGGTGTAGACATGTTTGGAAAGCGCATTGGGTTTCTCAAATTTAAAGCTGACATTTATAAGCCAGTCTATGTTTCCATTTTCTTGTGTTAA 678 0.4263 MAFRVSCSVLELGGGNCFLHLLLGVDVGLALVEGIVASLRCFRDWYNLEKLKQVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDASSGNGEEIIGLQYFQSRGMNXLATASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIAFFSSSFTPCRNAIDSSLFKQWLHNLQSEIGILADGTLALRQVLILGVDMFGKRIGFLKFKADIYKPVYVSIFLC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01670 225 Pfam Aldehyde dehydrogenase family 108 154 IPR015590 GO:0016491
Aip04g01670 225 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 105 158 IPR016162 GO:0016491
Aip04g01670 225 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 44 89 - -
Aip04g01670 225 SUPERFAMILY ALDH-like 110 154 IPR016161 GO:0016491
Aip04g01670 225 PANTHER T17B22.17 PROTEIN-RELATED 44 89 IPR044679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01670 Aip-Chr4 53302760 53304736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01670 112 149 Aldehyde Dehydrogenase Gene Family AT3G24503 81.579 9.79e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01670 K18447 - ahf:112799723 133.265