Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01665 CACGAAGAAAACCCTCACCATCGCAAAGATCGAAACCCGCCGTCTCACTATCATCGTACCCCAGTCACCACTCACCCCCACTCACCTGTCACCGCCACACACGACTCACCACTCACCACTGACCGTCGCTCCTCTTCGCCTTCCTGCTCTGATCGTCACTGTGCCGCCCATACCATCGTCGATCTCCGTGCTTCTCGTCGTCCTCTCTGTGCTCACGGCGTCGATTAGTGTTGGTGTGGTGAGATCACACATAGAAGGCCCTAGAATCTATTCTATAGGAATCCCTCCATCTAACATTGGTGAGCAATTTGGTCAACTACTGAAAAGCGGAAGAGGAACTGATGTTAGTTTTGAAGTGAATGGAGAAATTTTTGCGGCCCATAAATTGGTACTAGCTGCACGGTCACCCATTTTCAGAGCCCAAATTTGTGGTCCTGTGAAAGATCAGAATACTGATTGTATAAATACTGGCTACAACTTTAGCATTAGCAGAGCAGCATCATTGTTTTCAGCTGAAAGCAGTCTGTCTCAAGTTTATTGTAACCTCCGAAAACCTCAGAGGATTTCTAAGGCTACAATAAATGAGTATTTAGAGAAGATTGATGCCATTGCATCCAAACTACTTAACTTTGAGGCAGAAAAATGGGCTCCTTTTGATTTGTTTACCATTCTTCTGTATATCCTATTTTATCTTGCAAATCAACTACTGAAAAGCGGAAGAGGAACTGATGTTAGTTTTGAAGTGAATGGAGAAATTTTTGCGGCCCATAAATTGGTACTAGCTGCACGGTCACCCGTTTTCAGAGCCCAAATTTGTGGTCCTGTGAAAGATCAGAATGTTGATTGTATAAACACTGGCTACAACTTTAGCATTAGCAGAGCAGCATCATTGTTTTCAGCTGAAAGCAGTCTGTCTCAAGTTTATTGCAACCTCCGAAAACCTCAGAGGATTTCTAAGGCTACAATAAATGAGTATTTAGAGAAGATTGATGCCATTGCATCCAAACTACTTAACTTTGAGCTGTGTCGCCGCTGTCGAATCTGGTCCAGCCGCCGTCCCCACTCCCACTGCTCCAGCACCGTCGCAGCTTGTCTATCGTCGGGTTGCTTCACCTCTGTTCCATGGCCGTTGTCTATTCCATTTCTGTCGCCTGTGCCCCACTTCTCCTTCTCCCTCATCTCGATTGACAAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGATAACTGTTTCTATGTTTCTAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACTATGGTTGACTCTTTACCTTAG 1348 0.4458 TKKTLTIAKIETRRLTIIVPQSPLTPTHLSPPHTTHHSPLTVAPLRLPALIVTVPPIPSSISVLLVVLSVLTASISVGVVRSHIEGPRIYSIGIPPSNIGEQFGQLLKSGRGTDVSFEVNGEIFAAHKLVLAARSPIFRAQICGPVKDQNTDCINTGYNFSISRAASLFSAESSLSQVYCNLRKPQRISKATINEYLEKIDAIASKLLNFEAEKWAPFDLFTILLYILFYLANQLLKSGRGTDVSFEVNGEIFAAHKLVLAARSPVFRAQICGPVKDQNVDCINTGYNFSISRAASLFSAESSLSQVYCNLRKPQRISKATINEYLEKIDAIASKLLNFELCRRCRIWSSRRPHSHCSSTVAACLSSGCFTSVPWPLSIPFLSPVPHFSFSLISIDKELLQEVVNMGFDRNQLVESLCNRIQNEDNCFYVSSGYLGAEFQETMVDSLP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01665 448 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 234 284 - -
Aip04g01665 448 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 68 155 - -
Aip04g01665 448 SMART BTB_4 242 353 IPR000210 GO:0005515
Aip04g01665 448 SMART BTB_4 113 224 IPR000210 GO:0005515
Aip04g01665 448 Gene3D Potassium Channel Kv1.1; Chain A 228 365 IPR011333 -
Aip04g01665 448 SUPERFAMILY POZ domain 230 283 IPR011333 -
Aip04g01665 448 Pfam BTB/POZ domain 233 283 IPR000210 GO:0005515
Aip04g01665 448 Pfam BTB/POZ domain 104 152 IPR000210 GO:0005515
Aip04g01665 448 ProSiteProfiles BTB domain profile. 242 269 IPR000210 GO:0005515
Aip04g01665 448 SUPERFAMILY POZ domain 90 155 IPR011333 -
Aip04g01665 448 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 234 284 IPR045005 GO:0016567
Aip04g01665 448 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 68 155 IPR045005 GO:0016567
Aip04g01665 448 CDD UBA_SnRK1_plant 395 424 - -
Aip04g01665 448 Coils Coil 193 213 - -
Aip04g01665 448 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 394 425 IPR015940 -
Aip04g01665 448 Gene3D Potassium Channel Kv1.1; Chain A 83 166 IPR011333 -
Aip04g01665 448 ProSiteProfiles BTB domain profile. 113 140 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01665 Aip-Chr4 52397315 52402307 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip04g01665 BTB 1.4e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01665 K10523 - aip:107636513 417.157