Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01643 ATGATGCCACCTAGGGCTCCACCGCCGTCGTTTTCGTTGTTGAGCACCAGTGAAAGAGAGCTCGAGGAAGAGAGAAAACGCGAGGGAGTAGAGAAGAAGGGGGTCAATGCTTCTAATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTTAGACTAGCTCGTAGGATTAGACGTGACAAAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTACTTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCGTTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGAttga 429 0.4406 MMPPRAPPPSFSLLSTSERELEEERKREGVEKKGVNASNVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDKVERGRDINSVLEQYAKFVKPTFDDFVLPSKKYADVIVPRGGDNHVAIDLIVQHIRTKLGQHD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01643 142 MobiDBLite consensus disorder prediction 1 30 - -
Aip04g01643 142 PRINTS Uridine kinase signature 83 94 - -
Aip04g01643 142 PRINTS Uridine kinase signature 69 79 - -
Aip04g01643 142 PRINTS Uridine kinase signature 105 118 - -
Aip04g01643 142 Pfam Phosphoribulokinase / Uridine kinase family 31 125 IPR006083 GO:0005524|GO:0016301
Aip04g01643 142 PANTHER URIDINE KINASE 31 142 - -
Aip04g01643 142 Gene3D - 6 142 IPR027417 -
Aip04g01643 142 CDD UMPK 31 137 IPR000764 -
Aip04g01643 142 PANTHER URIDINE KINASE-LIKE PROTEIN 5 31 142 - -
Aip04g01643 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01643 Aip-Chr4 47824135 47826652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01643 35 142 PRT Gene Family AT5G40870 89.815 2.56e-64 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01643 K00876 - han:110904081 206.453