Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01639 ATGCTTGAGCATAATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGCAAAATGGGCGTTGAGGGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTTACGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATTAAGGAGGCTGAGGAGTATGAGGGTGGTTGTTGTTCTGTCTTTGCTGAGGTTGATGGTGCACCTGTGTCACTTAATTAG 339 0.5015 MLEHNVGGFRFDQREAKWALRALRAVVRLQAIFYGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQTLLDQYRNQADPIKEAEEYEGGCCSVFAEVDGAPVSLN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01639 112 PANTHER IQ-DOMAIN 5-RELATED 16 83 - -
Aip04g01639 112 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 16 83 - -
Aip04g01639 112 ProSiteProfiles IQ motif profile. 24 51 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01639 Aip-Chr4 46085478 46086548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01639 16 92 IQD Protein Family AT1G72670 62.338 1.54e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01639 - - ahf:112710157 124.405