Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01632 atgccactctttgtaatggagaaactgggaatccttgagAAACCCTGTCACCATCGAAGAAACCCTTTAAACCTCACCATCGCGAAGAAACCCTCTCGCTACAGAAACCCTCTCACTCACCACTCACCGTCGCTCCTCTTCACCCTCTTCCTCGTCGCTGCGCTGCCCTCACCATCGTCATCTCTGCGCTTCTCATCGTCCTTCCCCTTTCAATTCGATCGAGTAACCCTCATCTCTGCACTATATACTGAGCTTAATGAATATTTTTTCTTTGATTCGTCACCAATTCTCGCTACCTACACAAACTCGCGCGCCTTCTCGTTTGATTCGTCGCCGCTGCTCATTTTTTCTTCAAGGGTTTTCACCTTCGATTCGTGGTCGCTCATCTCTTCTTCACCGTTGCCATTCATCACCGCGCTCACCAATGTCAAAGAAACTGTGTGCTCTCTAGCGACCTCTTCTCTGCTCTACTATGAAGCATCAAGGTTTCCAATGAGGCAAAGCATCGATCCCTTACAAGCGAGTCGTGCAATTGAGTTGAAGAATCATTCTTTACTACTTGGAAAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGGAATGTTTTTGTTAAGAACTTAGCTGAATCCATAGATAATGCGGGATTACATGATTTATTTCAAAAGTTTGGAGATATCTTGTCCAACTTTGGGAATTGCTTTGGTGCTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCATGGGAACGAGGTAATAGAATTGAGGTTGTGACTAATTGA 819 0.431 MPLFVMEKLGILEKPCHHRRNPLNLTIAKKPSRYRNPLTHHSPSLLFTLFLVAALPSPSSSLRFSSSFPFQFDRVTLISALYTELNEYFFFDSSPILATYTNSRAFSFDSSPLLIFSSRVFTFDSWSLISSSPLPFITALTNVKETVCSLATSSLLYYEASRFPMRQSIDPLQASRAIELKNHSLLLGKVIRVMWSRRDPDVRKSGRGNVFVKNLAESIDNAGLHDLFQKFGDILSNFGNCFGASNWFRGSDDSDTAEKPWERGNRIEVVTN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01632 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 236 IPR000504 GO:0003723
Aip04g01632 272 PANTHER POLYADENYLATE-BINDING PROTEIN 168 237 - -
Aip04g01632 272 SUPERFAMILY RNA-binding domain, RBD 170 238 IPR035979 GO:0003676
Aip04g01632 272 PANTHER RNA BINDING PROTEIN 168 237 - -
Aip04g01632 272 Gene3D - 197 258 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01632 Aip-Chr4 45070553 45073338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01632 139 236 Eukaryotic Initiation Factors Gene Family AT2G36660 53.535 4.33e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01632 K13126 - aip:107615723 272.707