Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01630 ATGGGCGACGGCAAGGTCAATCTCCCCGACGATCGCTTCTCCTCCAAGCCCTCCAATTCCAAAGCCAAGGATAAATTGAATTCAACATGGAGAGAGGCTTTCAGGAAGGCATATAAGTCTATGGACAAAGAGCTCTGGTCTCATCCGAATTTGGACTGCTTTTGTAGTGGGAGCACGGTTGTCACTATAGTGAAGCAGGCAGAGAGTGGTTGGCACAAGGAAGATGAAATCCTTGATGACAGTTGGGTTCAGCAAAGTAGAAAGAAAGGGCCAGCTACCTCGCATCTCGATGGATTGAATTGGGAGGTGCTTATTGTCAATGAGTCGGATGTCGATGCCTTTTGGCTACCTGGTGTTAAGATCGTTGTATACACCAGATTGTTAGAGCATTTTAAAAGTGATGCTGAGATTGCCACTATAATTGGACATGAGTCACTACTCACTCACCAACCAAATAAGGTTTCTCTGTTTAAACATTTCAAATGCATGGTGGCGAAGTACCGGAAGTCCACCCTATGCATGGGAGCAGGGGATCCCATATCCATGTCGCAGGTGGCTGCCGTTGCCAAGCGTGAGTCTCAAGTCAAGGTGGAGCTCTCTGAGTCTGCGAGGGCAGGCGTCGGGGCCAGCTACCAGTGGATCATGGACATCGTTGAAAAAGGCATTACCATCTATGGTGTTATCACTGGCTttgcatgctatatttataagtttgTGTATGGTAttggtgattattga 738 0.4553 MGDGKVNLPDDRFSSKPSNSKAKDKLNSTWREAFRKAYKSMDKELWSHPNLDCFCSGSTVVTIVKQAESGWHKEDEILDDSWVQQSRKKGPATSHLDGLNWEVLIVNESDVDAFWLPGVKIVVYTRLLEHFKSDAEIATIIGHESLLTHQPNKVSLFKHFKCMVAKYRKSTLCMGAGDPISMSQVAAVAKRESQVKVELSESARAGVGASYQWIMDIVEKGITIYGVITGFACYIYKFVYGIGDY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01630 245 Pfam Aromatic amino acid lyase 181 231 IPR001106 -
Aip04g01630 245 PANTHER PHENYLALANINE AMMONIA-LYASE 153 233 - -
Aip04g01630 245 MobiDBLite consensus disorder prediction 1 26 - -
Aip04g01630 245 SUPERFAMILY L-aspartase-like 150 231 IPR008948 GO:0003824
Aip04g01630 245 PANTHER HISTIDINE AMMONIA-LYASE 153 233 IPR001106 -
Aip04g01630 245 Gene3D Metalloproteases ("zincins"), catalytic domain 78 149 - -
Aip04g01630 245 Gene3D - 7 77 IPR036457 -
Aip04g01630 245 Gene3D - 150 233 IPR024083 -
Aip04g01630 245 Pfam Peptidase family M48 83 144 IPR001915 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01630 Aip-Chr4 44784039 44787626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01630 153 237 Monolignol Biosynthesis Gene Families AT2G37040 44.706 4.03e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01630 K23010 - adu:107495268 150.599