Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01621 ATGGCTGCTCAACTGCTATGTTGTAGTACTGTGGAAGGAAGTGAAGGACACATGATTGAAGAAGCCAAATCAATCAACCTTTCACTAAGTTCACTGGGAAAGTGCATTAATGCTCTAGCAGAGAACAGTGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTTCGAGGAAGTGAAGGACACATGATTGAAGAAGCCAAATCAATCAACCTTTCACTAAGTTCACTGGGAAAGTGCATTAATGCTCTAGCAGAAAATAATGCTCATGTTCCATTTTGTGATTCAAAGCTTACCAGGATGCTTCGAGGTTCTTTTGGAGGTTGCATGTGCCTTAATTTTTCTTGTTAG 354 0.4068 MAAQLLCCSTVEGSEGHMIEEAKSINLSLSSLGKCINALAENSAHVPFRDSKLTRMLRGSEGHMIEEAKSINLSLSSLGKCINALAENNAHVPFCDSKLTRMLRGSFGGCMCLNFSC 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01621 117 Pfam Kinesin motor domain 14 60 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01621 117 ProSiteProfiles Kinesin motor domain profile. 1 117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01621 117 PANTHER KINESIN-RELATED 12 60 IPR027640 GO:0003777|GO:0007018
Aip04g01621 117 PANTHER KINESIN-RELATED 59 110 IPR027640 GO:0003777|GO:0007018
Aip04g01621 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 109 IPR027417 -
Aip04g01621 117 PANTHER KINESIN-LIKE PROTEIN KIN-UC 12 60 IPR033291 GO:0008017|GO:0032886|GO:0048364
Aip04g01621 117 PANTHER KINESIN-LIKE PROTEIN KIN-UC 59 110 IPR033291 GO:0008017|GO:0032886|GO:0048364
Aip04g01621 117 Gene3D Kinesin motor domain 61 116 IPR036961 -
Aip04g01621 117 Gene3D Kinesin motor domain 8 60 IPR036961 -
Aip04g01621 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 60 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01621 Aip-Chr4 43460914 43465252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01621 13 85 Calmodulin-binding Proteins AT5G65930 40.000 8.77e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01621 - K10396 pvu:PHAVU_008G075500g 97.8265