Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01618 ATGGAAAATAGTTCAGGAATTTCAACAACATTGTTCATCACCTTTTTACTACTAATTCCTTCTTGTTGTGTTATCTTTGTGAATTGCAAAACCCTTGAAAGTTCATCACTATCACTAGATTTGACGATCCCAGACATTTTAGGGTTCTTAGACGAGAGACTAGCTCTTATATTCCCAATAATTCAAGCATTCAAGACCACAATAACTTCTGACCCGTTGGGTATAACCTCAACATGGAGTGGTCCAAACATATGCAACTACACTGGCTTCTACTGCGACAACCCACCCGACAACAAAACCGCGGTAACCGTCGCATCCATAGATTTCAACGGCTTCCAGCTCTCCGCTCCGTCCCTCGACGGCTTCATAGACCAGCTCCCGGACTTGGCAATATTTCACGCCAACTCCAACAACTTCTCTGGCACCATTTCTCCGAACATAGCGAAACTAAAGTTCCTGTACGAACTGGACTTGAGTAACAACCTCCTCTCCGGCGTGTTCCCCGTTTCCGTTCTCAACATGCCCACATTGTCCTTTCTCGACATAAGGTACAATTTGTTTTCCGGTACAGTGCCACCCAGCATATTTACCGAAGCTTTGGACGTACTTTTTCTGAACAACAACAATTTCGCCCTGACTCTTCCCAACAACTTAGGGGACACAAAGGCTCTCTACCTCACTCTCGCAAACAACAAATTCACCGGCCCCATTCCGCGAAGCATCAGAAAAGCCTCGGCCACGCTGACTGAGGTTCTCTTCCTTAACAACCTCCTGACCGGTTGCCTGCCCTATGAGATCGGGTTCTTGAAAAAGGCCACCCTCTTGGACGCCGGAAACAACCTCCTCACAGGGCCGTTGCCATCCTCCTTGGGCTGCTTGGAGAGCGTGGAGCAGCTAAACCTAGCCGGGAACCTGTTGTACGGACAGATTCCGGAAGTGGTGTGCGCGCTTGGTAACTTGGCGAATTTGTCACTGTCCTATAACTACTTCACCAAGGTGGGACCACTGTGCAGGAATATGATTAAGAAGGGTGTTGCTGATGTGAGGAAGAACTGTATTTTGGGGCTTCCCAATCAGAGATCGGCGCAGGAGTGTTTTGCGTTTTTCTTGTCGCGGAGAAGTTGTGGGAACCCGGCGTGGTTTAACTTCTTACCGTGTAAGATTCCGCCGTGGAAGAAACCTAATAGTGAGAGCAATAGTACAGTAACAATGACGAGGAAGAGGAATTTGCTTTCATATTCTGCTCCTTCCAGAAATAGAGTGCTTTTGTAG 1272 0.4756 MENSSGISTTLFITFLLLIPSCCVIFVNCKTLESSSLSLDLTIPDILGFLDERLALIFPIIQAFKTTITSDPLGITSTWSGPNICNYTGFYCDNPPDNKTAVTVASIDFNGFQLSAPSLDGFIDQLPDLAIFHANSNNFSGTISPNIAKLKFLYELDLSNNLLSGVFPVSVLNMPTLSFLDIRYNLFSGTVPPSIFTEALDVLFLNNNNFALTLPNNLGDTKALYLTLANNKFTGPIPRSIRKASATLTEVLFLNNLLTGCLPYEIGFLKKATLLDAGNNLLTGPLPSSLGCLESVEQLNLAGNLLYGQIPEVVCALGNLANLSLSYNYFTKVGPLCRNMIKKGVADVRKNCILGLPNQRSAQECFAFFLSRRSCGNPAWFNFLPCKIPPWKKPNSESNSTVTMTRKRNLLSYSAPSRNRVLL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01618 423 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 10 419 - -
Aip04g01618 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 419 - -
Aip04g01618 423 SUPERFAMILY L domain-like 68 355 - -
Aip04g01618 423 Gene3D Ribonuclease Inhibitor 221 354 IPR032675 -
Aip04g01618 423 Gene3D Ribonuclease Inhibitor 59 220 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01618 Aip-Chr4 43117809 43120355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01618 40 376 Leucine-rich Repeat extension Gene Families AT3G24480 46.313 1.14e-92 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01618 - - gmx:100813314 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01618 04 43117809 43120355 Aip04g01618 04 43117809 43120355 ECH