Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01614 ATGGGAAGAGGAACAACAACAACCAACTCCCTGTTCTTTTCATCACTACTCTTATTGCTATCTTCTCTCTTGTTCCAAAACGGCGTCGTTTATGCTCAAGAAAAGATAGCATCATCAGAGGAAGAAGCACTGGGCTTATTTCAAGAAAGAGAGACACTTGAAATCATCATAGGAGGTGGAAGTACACCTTCCCCTTCCCCTTCCCCTGCACCTACGCCACCTGATTATACGCCATGCCCTCCGCCACCGAAACCGCTGAGCCGTTTGGACAAAGCGCGAAAAGTGCTCCTCAACTTCACCAACTACATCGTAGACCCAAAAGGTTTCACCAGTAACTGGTGCACACAGACAATTAACACGTGCGATTTCAAAGGAATTCGGTGCGCCCCATACCCACACTCAAACGAACTTGCAGTTGCAGGGTTGGACCTCAACCAAGCNGAACTCACATTCTTCCATGTTAACTCCAACAACTTCTCCAGTTCCGTACCAAAGGAAATAATCAGTTACGGCTTTTTCTTCGAGCTTGATCTTAGCAACAACAAGCTTTGTGGTCAGTTTCCAATGGAAACGCTTAAGAACAAGAACCTAGTGTTCTTGGACCTCAGGTTCAACAACCTCGCCGGCCCGATTCCATGGCAACTATTCGAAATGGATCTCGACGTGATTTTCATCAACAACAACAAGTTCAACCAGTTCCTCCCCCAGAATTTCGGAAATACCCCCGCAAGGTACCTGACCTTTGCCAACAATCAATTATGCGGTCCGATACCAAGGAGCATCGGCAAGGCAGCCAACACTCTGACGGAGGTGCTCTTCCTTGGGAACAGGTTTGATGGCTGCTTGCCGTACGAAATCGGAAACCTAAAGAAAGCAGTTGTGTTTGATGTGAGCATGAACCAATTAACAGGTCCAATACCGTACTCGTTTGGTTGCTTGAGGCAGATTCAATTCTTGAATCTTGCGAAAAACAAATTCTACGGTGCGGTTCCGGAGAACGTTTGCAAGCTTCCGGGGCTGATTAATAACGGAAACTTGACCCTGTCAAACAACTACTTCACAGAGGTTGGTCCTGAATGCAGGAAATTGATAAAGTCAAAGGTTTTGGATTTGACCAATAACTGTGTTCCGGGTTTACTGAACCAGAGGCCACAAAAAGAGTGTTGGGAGTTTCTTCATAGTGTGAAGCCTTGTCCAAATGAGAAGTATCTTTTGAGTTATGCACCTTGTGCGGGATGGAAGGAAACTGAGAACACGGAGGAGGTGGCAGCGGCGACGGAGCCTGTTACTTATAACGCTCTCAAACCGCACCGGTTGAGACTTTGA 1326 0.4668 MGRGTTTTNSLFFSSLLLLLSSLLFQNGVVYAQEKIASSEEEALGLFQERETLEIIIGGGSTPSPSPSPAPTPPDYTPCPPPPKPLSRLDKARKVLLNFTNYIVDPKGFTSNWCTQTINTCDFKGIRCAPYPHSNELAVAGLDLNQXELTFFHVNSNNFSSSVPKEIISYGFFFELDLSNNKLCGQFPMETLKNKNLVFLDLRFNNLAGPIPWQLFEMDLDVIFINNNKFNQFLPQNFGNTPARYLTFANNQLCGPIPRSIGKAANTLTEVLFLGNRFDGCLPYEIGNLKKAVVFDVSMNQLTGPIPYSFGCLRQIQFLNLAKNKFYGAVPENVCKLPGLINNGNLTLSNNYFTEVGPECRKLIKSKVLDLTNNCVPGLLNQRPQKECWEFLHSVKPCPNEKYLLSYAPCAGWKETENTEEVAAATEPVTYNALKPHRLRL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01614 441 MobiDBLite consensus disorder prediction 57 86 - -
Aip04g01614 441 Pfam Leucine rich repeat N-terminal domain 91 128 IPR013210 -
Aip04g01614 441 Gene3D Ribonuclease Inhibitor 266 389 IPR032675 -
Aip04g01614 441 Gene3D Ribonuclease Inhibitor 89 265 IPR032675 -
Aip04g01614 441 SUPERFAMILY L domain-like 92 376 - -
Aip04g01614 441 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 35 426 - -
Aip04g01614 441 MobiDBLite consensus disorder prediction 64 86 - -
Aip04g01614 441 PANTHER BNAC05G26270D PROTEIN 35 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01614 Aip-Chr4 42705118 42707255 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01614 105 388 Leucine-rich Repeat extension Gene Families AT1G62440 42.000 1.34e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01614 - - cam:101512430 474.167