Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01605 ATGCTTAATCTATTGGCAGTGTTACAGAAAGATAAGTTCAATCCCAGATTCTATGTTGCTGCTGCTACTGATAATATGAGTCTTCAAAAGGCTCAGTTGCTGGAGAACTCCTTGGTAGATCAGCTATCCATTAAAGCGGGAGTAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAGCAATCCTGGACTCCAGGTGTCCTAATTCAAGCCAAAGATCGTGCTTATAGAATTGGCCAGTATTCTTTCTTTGGAGGCAATATTGGAAGAGATGGCTCGTGCTACTCAACTGTTAGGGGTTGA 312 0.4167 MLNLLAVLQKDKFNPRFYVAAATDNMSLQKAQLLENSLVDQLSIKAGVVGLTLTAASTVIFTEQSWTPGVLIQAKDRAYRIGQYSFFGGNIGRDGSCYSTVRG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01605 103 CDD SF2_C_SNF 42 83 - -
Aip04g01605 103 Gene3D - 21 85 IPR027417 -
Aip04g01605 103 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 32 84 - -
Aip04g01605 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 85 IPR027417 -
Aip04g01605 103 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 32 84 IPR030101 GO:0006281|GO:0031297|GO:0036310
Aip04g01605 103 SMART helicmild6 2 82 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01605 Aip-Chr4 41614563 41616638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01605 42 84 RAD5 or RAD16-like Gene Family AT1G05120 53.488 1.34e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01605 K14440 - adu:107485125 80.1073