Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01598 ATGGCTTCCGCCGCCATCCGTCGCGCTCAGGAGCTTCCATCCTCGTCTGGTCGTTGTCGTCGTGCTCCAACTCCTCTCCTCATTCACCAATCGCAGCTTCTTCCTCGTTCTCCGCATCCTTTGTCTGGTCTACCTCTACTCAACCACTTTCCCTCATACTCTGCCCAGACTGCTCAAATCGAAGAAGGCAATGGCTTCTCTGCTCACTGCTACCCTGTCGACAGGTCTCCTTGGTGCCGCCTCTTCTTGCCACCTGCGCAGCCCGAGTTGCTCCGCCCACCCGCAAGGACACCGTCGTCTTTAACACCACAACACAACCCCACCGCTGCTGCTATTCATGGAGGCGTCAACGACGCATCGCCTCCTCCAAGCCGCAACAGCAACCACGTCTGTGTCCCCGCCGCGTCTAGCCACCGACCGTCGCACACCGCTCTTTGCAATCATCCCGGTGTTCTCCAATTGGTTATTCATAGGGATGTGAAGAGCAATAACATATTGCTTGATCATGAGTTTAGGCCTCATGTAGCAAATTTTGGGCTTGCTAAGACCTTGCAACGTGAGGCAGGTGACAGAGATGCTGGTGCTGGTGCCGGTGCCATGTCCAGGGTTGCTGGATCATATGAATACATTGCCCCGGGAGCAAAGTCAGAACTTGTAAATGGTTGA 666 0.5495 MASAAIRRAQELPSSSGRCRRAPTPLLIHQSQLLPRSPHPLSGLPLLNHFPSYSAQTAQIEEGNGFSAHCYPVDRSPWCRLFLPPAQPELLRPPARTPSSLTPQHNPTAAAIHGGVNDASPPPSRNSNHVCVPAASSHRPSHTALCNHPGVLQLVIHRDVKSNNILLDHEFRPHVANFGLAKTLQREAGDRDAGAGAGAMSRVAGSYEYIAPGAKSELVNG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01598 221 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 153 212 - -
Aip04g01598 221 Pfam Protein kinase domain 154 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01598 221 MobiDBLite consensus disorder prediction 90 128 - -
Aip04g01598 221 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 153 212 - -
Aip04g01598 221 SUPERFAMILY Protein kinase-like (PK-like) 155 212 IPR011009 -
Aip04g01598 221 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g01598 221 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01598 221 Gene3D Transferase(Phosphotransferase) domain 1 128 218 - -
Aip04g01598 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01598 Aip-Chr4 39581225 39583420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01598 155 212 Receptor kinase-like Gene Family AT5G65710 65.517 3.16e-16 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g01598 Pkinase 1.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01598 - K00924 aip:107642268 115.161