Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01588 ATGGAAGGGAGTGAAGGTGCAATAACATTTCCTGGGATTTGTGTGACATGGGGTGTTGCAGTTATGATATTGATCTATGCTCTTGGTCATATTTCTGGTGCACATTTTAATCCCGCTGTCACCATAAGCTTCGCTCTCTATCGCCGATTCCCTCCCAGACAGGTGCCTCTATATTTGATAGCGCAAGTGCTAGGGTCAGTGCTTGCGAGTGGGACATTGTACCTTCTATTTGATGTGACCGATGATTCTTTCTTCGGAACGGTACCAAAAGGGTCATATATTCAGTCTCTTGTATTCGAGATCCTCACTTCCTTTCTTTTGATGTTTGTTGTCTCTGCCGTCACCTCTGATGATAGAGCAGCCAGTATCAGGAGCATCCATGAACCCAGCAAGAAGCTTAGGACCAGCGTTGGTCTCCAAGAAGGTGCTAGGGCATGTACTGCTAAAATTGGAGATTCACTTCTGGATTCACTGGTTAATAGGAGGGTTCCATGA 495 0.4566 MEGSEGAITFPGICVTWGVAVMILIYALGHISGAHFNPAVTISFALYRRFPPRQVPLYLIAQVLGSVLASGTLYLLFDVTDDSFFGTVPKGSYIQSLVFEILTSFLLMFVVSAVTSDDRAASIRSIHEPSKKLRTSVGLQEGARACTAKIGDSLLDSLVNRRVP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01588 164 Gene3D Glycerol uptake facilitator protein. 1 131 IPR023271 -
Aip04g01588 164 PANTHER AQUAPORIN NIP4-1-RELATED 5 122 - -
Aip04g01588 164 Pfam Major intrinsic protein 6 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g01588 164 PANTHER AQUAPORIN NIP2-1 5 122 IPR034294 -
Aip04g01588 164 PRINTS Major intrinsic protein family signature 99 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g01588 164 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g01588 164 PRINTS Major intrinsic protein family signature 17 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g01588 164 SUPERFAMILY Aquaporin-like 6 121 IPR023271 -
Aip04g01588 164 ProSitePatterns MIP family signature. 35 43 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01588 Aip-Chr4 38032267 38036935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01588 6 120 Major Intrinsic Protein MIP AT5G37810 65.217 2.38e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01588 K09874 - gmx:100819179 183.726