Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01584 ATGACTTATTTGTACTTGTTCTGTCTCGGGCATGTTCTTCACAAGTATGTCAATGAAGATGTCTCACTAGGCTCATGGTTTATTGGACTTGATGTGGATCATATTGATGATAGGAGACTCTGTTGTGGCACTCCACTAGAGAATTTCTCGCATTCTAATAAACTAGGAGAAGGTGGATTTGGATCTGTTTATAAGGGTAAGCTCTCCAATGGACAAATGATTGCTGTGAAGAGGTTATCGAAGGACTCAGGCCAAGGAGATATGGAATTCAGGAATGAAGTGCAATTATTAGCCGAGCTTCAACACCAAAATTTAGTTAAGCTTCTTGGTTTTTGCTTGAAAGGAAGTGAAAGGTTACATATCTATGAATTTATTCCCAATAAAAGCCTTGATTACTTCCTATTTGATCCAACCAAGCGCAGACAATTGGATTGGATAAATAGATTCAAACTCATTGAAAGAGTTGTACAAGCCCTACTTTATCTTCATAAGGATTGTAAGACACGTATTATACACCGAGATCTAAAACCAAGCAATATTTTCTTAGACAAAGAGATGAATGCTAAGCTATCAGATTTTGGATTGGCACGATTATTTATTATGGACCAAAAGCAAGAAAAGACCAGTAAAATTGTTGGTATATAG 645 0.3659 MTYLYLFCLGHVLHKYVNEDVSLGSWFIGLDVDHIDDRRLCCGTPLENFSHSNKLGEGGFGSVYKGKLSNGQMIAVKRLSKDSGQGDMEFRNEVQLLAELQHQNLVKLLGFCLKGSERLHIYEFIPNKSLDYFLFDPTKRRQLDWINRFKLIERVVQALLYLHKDCKTRIIHRDLKPSNIFLDKEMNAKLSDFGLARLFIMDQKQEKTSKIVGI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01584 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Aip04g01584 214 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Aip04g01584 214 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 213 - -
Aip04g01584 214 SMART serkin_6 49 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01584 214 Pfam Protein kinase domain 50 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01584 214 SUPERFAMILY Protein kinase-like (PK-like) 43 206 IPR011009 -
Aip04g01584 214 Gene3D Transferase(Phosphotransferase) domain 1 125 214 - -
Aip04g01584 214 Gene3D Phosphorylase Kinase; domain 1 44 124 - -
Aip04g01584 214 ProSiteProfiles Protein kinase domain profile. 49 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01584 214 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 47 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01584 Aip-Chr4 37699313 37700326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01584 6 213 Receptor kinase-like Gene Family AT4G23230 55.189 1.19e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip04g01584 Pkinase 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01584 - - gmx:100786869 247.669