Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01583 ATGAATACTCTTTTCTTCATTATCTTCTTTTGCTTATGCATTCAAACCCATGCATCAGCTTCTTCGAATTCTTCCAAATCAAACACACTGTTTCCAAAAGAAGCTCACCCCACAAAATCAGGTTACCTTTCTGTCAGCAAAACCTCTTCTTCCGCCTTCTTCTACACTTTCTATGAAGCTCAGAACTCGACCTTGCCTCTCTCCAAAACCCCGCTTCTCATTTGGCTCCAAGGTGGCCCTGGAAGCTCCTCGATGATTGGCAGCCTCTATGCAGTTGGACCATGGCGTATCACAGAATCCATCACCTTTGAACCCAACCCTGGTGCTTGGAACAAGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCGCAAGAGATCCCAACGAATCAAGAAGGTATTGCCAAACACCTTTATGTTGCTCTTACAAGGTTTCTTCAACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACAGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATTGGGAATGGAATAATTGAGGCAGTGACCCAATCACGCACGCATCCGGCTAATGCTTATTATGAGGGTCTAATCAATGAGAGGCAAAAGAGTGAGTTGGAGAAGGATCAACTGGAAGTAGTTAGGTTGGCACAGATTCAGCATTGGAGTGAAGCAACGATTGCATGGCGAAGACTCCAGGGGAAGTTGCAAAACATGTCAGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCCTTATCACTATCAAGATTGGGTTACTCAATTCTTGAATATAGCTGAAGTGAAGAAGGCATTGGGCGTGAATGAACCTCAAGTGTTTAAATCGAGCAGCAGTAATGTTGGGGAAGCATTGCTAGGAGATATAATGAAGAGTGTGAAGTTTATGGTGGAGGAGTTGTTGAAGAGCAACACTATTAGGGTGTTGTTGTACCAAGGTCAACTTGATTTGGTCGCTGGTCCGGTTCAAACTGCGGCATGGGTGAATACTATGAAATGGGAAGGGATTGAGGAGTATGTGAATGCAGAGAGGAAGATATGGAGGGTGAATGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACCAATGTTGTTGTCTTGGGTGGTGGCCATCTTATGCCTGCTGACCAGCCTGTTAATGCTCAGACAATGATACAAGATTGGGTCTTGCAAAGGGGTTTGTATCAAAATGTGTAA 1320 0.4371 MNTLFFIIFFCLCIQTHASASSNSSKSNTLFPKEAHPTKSGYLSVSKTSSSAFFYTFYEAQNSTLPLSKTPLLIWLQGGPGSSSMIGSLYAVGPWRITESITFEPNPGAWNKFFGVLFLDNPIGTGFSIASSPQEIPTNQEGIAKHLYVALTRFLQLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNAQLHASKRVNLVGVAIGNGIIEAVTQSRTHPANAYYEGLINERQKSELEKDQLEVVRLAQIQHWSEATIAWRRLQGKLQNMSGLATLYDYTRKDHPYHYQDWVTQFLNIAEVKKALGVNEPQVFKSSSSNVGEALLGDIMKSVKFMVEELLKSNTIRVLLYQGQLDLVAGPVQTAAWVNTMKWEGIEEYVNAERKIWRVNGELAGYVQQWKSLTNVVVLGGGHLMPADQPVNAQTMIQDWVLQRGLYQNV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01583 439 Pfam Serine carboxypeptidase 37 430 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 SUPERFAMILY alpha/beta-Hydrolases 37 431 IPR029058 -
Aip04g01583 439 Gene3D alpha/beta hydrolase 15 437 IPR029058 -
Aip04g01583 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 433 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 Coils Coil 225 245 - -
Aip04g01583 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 179 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Aip04g01583 439 PANTHER CARBOXYPEPTIDASE 21 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01583 Aip-Chr4 37564749 37566068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01583 297 430 Calmodulin-binding Proteins AT2G22960 24.444 5.24e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01583 K09645 - gmx:100780822 572.392