Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01578 ATGTACTTCCTTGAAACTTACTTGGATATACGACAACTTAAGACACTCAAACTTCCTACTCTTCCAAAGACTTTAGAAGGCGTAATCAGCCAAGATAAATTTTTGAAATCCAGGGCCTACAATCTTAATAAAAGTCTTGTAGACCACCTTGTTGTTATTACCATTTTTTGTTTGTGCTGTGAGATTTTCGCCGATGATAGCCGCGACTGGTTTGTTGGTGGCATAGTTGGTGCTCTTGGTGATCCTGTTACTGTCTCCAGTGAGAAGAACAAGATCACTATTACCTCTGATAGTAATTTCTCCAAGCGAGTCAGAGCTCATCGAAACCCTAAGCTTGCGATAGACATCTCCACCGCCATCTCCGCCGCTGCCTCCGCCGCCATGGCCGCCGCTAGAGTTCATCTCTTTTCTGCTTCTGCCATAAAGCCATTGAGATCGAGCCAAGGCATCTCATTCACCAACGCGTTTCCAAATCTAATCGCAATGCCCAAGCCTTTGAGATCGAGAAAAAGTACCTCTTCGGTTAACTCTCCTCCGCCAATGACGCTCATGTTCTCCATCGGCATTCTATCCCTTGTGTACGCTCTTCTTTCCACTCGTTCTCAGTTTCTGGGACCAGAGCTTGGTATTGAACATTGCGATGTAATGGCAGGAAAGCTTGCTGGATTACTGCATGATGTTGGCCATGGTCCCTTCAGCCACATGTTTAAGGGCAAGTTCCTTTTCCGGGTCTTTAATGGTGACAAATGGTCCCATGAGAAAATGTCAGCGAAGATGATAAATTATATGGTTGATGAACATAATATTGATATTGATCCTGAACTCCTCAAGAAAGTGAAGGGTCTATGCATCAGTTTGAAAGTGAAGTATGCTCTCTTATTTCTATTTACTGTTCTGTTTTCATCATTTAGCCTTTGA 918 0.4346 MYFLETYLDIRQLKTLKLPTLPKTLEGVISQDKFLKSRAYNLNKSLVDHLVVITIFCLCCEIFADDSRDWFVGGIVGALGDPVTVSSEKNKITITSDSNFSKRVRAHRNPKLAIDISTAISAAASAAMAAARVHLFSASAIKPLRSSQGISFTNAFPNLIAMPKPLRSRKSTSSVNSPPPMTLMFSIGILSLVYALLSTRSQFLGPELGIEHCDVMAGKLAGLLHDVGHGPFSHMFKGKFLFRVFNGDKWSHEKMSAKMINYMVDEHNIDIDPELLKKVKGLCISLKVKYALLFLFTVLFSSFSL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01578 305 SUPERFAMILY HD-domain/PDEase-like 202 276 - -
Aip04g01578 305 CDD HDc 204 275 IPR003607 -
Aip04g01578 305 Pfam HD domain 219 264 IPR006674 -
Aip04g01578 305 Gene3D Hypothetical protein af1432 183 288 - -
Aip04g01578 305 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 186 286 - -
Aip04g01578 305 Gene3D - 69 138 IPR038526 -
Aip04g01578 305 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 186 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01578 Aip-Chr4 37442055 37449386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01578 72 103 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 65.625 1.05e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01578 K22544 - ahf:112775860 143.665