Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01572 ATGTTTGGAGTACCTGCTCGTGTTGGTTTGGTTACTCCAATTGATGTTGTTGTTCCTCCAGGCAACACAGGGCTTGACCCCTCACAGACCTCGTTCTTCCAGGTTCTGAATATTCCAACCAAGATCAATAAGGGTACTGTTGAAATTATCACCCCTGTGGAACTTATTAAGAAGGGTGACAAGGTCGGTTCTTTTAAAGCTGCACTACTTTCCAAGCTTGGCATCAAGCCCTTTTCATATGGTCTTATTGTCCTGTCTATGACAATGGTTCAGTATTTAGCCTTGAGGTTCTTGATCTCACTGACGACGACCTTGTTGAGGAGTTCGCCGTTGGAGTCTCAATGGTGA 348 0.4483 MFGVPARVGLVTPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSFKAALLSKLGIKPFSYGLIVLSMTMVQYLALRFLISLTTTLLRSSPLESQW 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01572 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE 3 87 - -
Aip04g01572 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 3 87 - -
Aip04g01572 115 Pfam Insertion domain in 60S ribosomal protein L10P 6 75 IPR040637 -
Aip04g01572 115 Gene3D - 3 79 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01572 Aip-Chr4 36962572 36963152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01572 3 87 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 88.235 7.84e-48 153