Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01568 ATGGACGTGCAGTACCCGCCAGTTGTGGCACCACCTCATAAGAGCAGCCTACAGAAGTTCAAGGTCAAATTGAAGGAAACTTTGTTCCCTGATGATCCAATGAGACAATTCAAGGGTCAACCATTTGGTACAAAAATAGTCCTTGCTGCTCAGTATGTGTTCCCTATTCTTCAATGGCTCCCTCAATATAGCCTCAAACTCTTTAAATCTGACATTATTTCTGGTATCACCATTGCTAGCCTTTCAATCCCTCAGGGGATTAGTTATGCTAAGCTTGCAGGTTTACCTCCAAGTTTTGGACTTTATTCTAGTTTTGTTCCCCCACTTGTGTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAATTGGTCCAGCAGCTATTACTTCTCTTGTGTTAAGATCCATGCTTACGCAAGGAGTGTCTGCCACATCACAACCTCAACTCTTTCTTCAGCTTGCTTTTACTTCCACTCTTTTTGCTGGTGTCTTTCAGGCAGCTCTTGGTATTCTAAGGCTTGGATTTATCATTGACTTTCTATCAAAGGCCATACTTGTCGGATTCATGGCTGGAGTTGCTGTAATTGTATCTCTGCAGCAGCTTAAAAGTCTTCTTGGAATCACACATTTCACCAAAAAGATGACCATCGTTGATGTATTGAGTTCTGTTTTTAGCAATATTCACGAGTGGTCTTGGCAAACAATAGTAATGGGCGCTGGGTTCTTGATTCTACTACTACTAGCTAGGCAATTTAGCTTAAAGAAGCCAAAATATTTCTGGGTCTCAGCTGGAGCTCCTCTTCTGTCAGTAATAACGTCAACTGCCATACTTTTTGCAATTAGGGGTAAACATCCTGCCATTCTTGTTATTGGAAAGCTTCCAGAAGGAGTAAATCCTCCTTCAGTAAAGATGTTGTATTTCGAAGCAACTCATTTAGGACTGGCCATTAAAACTGGGATCATTGTTGGTATTTTATCCCTCACTGAATCTATTGCAGTTGGAAGGACATTTGCAGCTATAAGAAAATACAAAGTGGATGGTAATAAGGAAATGATAGCTATTGGGTTGATGAATGTAATAGGATCCACCACATCATGTTTTGCTTCAACAGGATCATTCTCTAGGACGGCTGTGAACCACAACGCAGGGGCAAAAACAGCGATGTCGAACATAGTTATGTCGGTGGCAGTGTTGGTGACACTCTTGTTTCTGATGCCATTATTGCACTACACACCGCATGTGGTGTTGGGTGCAATCATAGTAACAGCAGTCATTGGCTTTGTTGATATACCTGCTGCTTACCGTATTTGGAAGATTGACAAATTCGATTTCGTTGTCATGTTGACTGCATTCTTCGGTGTCATTTTTATCTCAGTTGAGTATGGCCTAGCTCTTGCTGTTGGTTTATCAATCTTAAGGATCCTATTGCAAATTACAAGACCAAAAACAGTAATGTTGGGGAACATACCAGGGACAAGATTGTATCGAGATCTTCACCATTATAATCAAGCTACAAGAATTCCTGGTTTTCTCATTTTAAGCATAGAAGCTCCCATCAATTTTGCCAACATCACCTATCTCCAACAaagGACTTTGCGATGGATTGAAGAAGAAGAAGAAAGCATGAAGGATAACTCAGTTTTTCGGTTTGTGATATTGGAGATGTCAGGTAGTTACATTATTATTCTAGCATTGGTGAATCCTCTTGCTGAAGTGATAGAAAAGCTGACAAAGGCAGATGAATCTGACAGCTTCATTAGAGAAGACTACCTCTTCTTGTCTGTTGGAGAGGCTGTTGGAAAACTTTCATCAATAATGGAGAACTCCCCTTCAGTCACCATGCAACAAGAGCAGCCACCTTACATGTCCCCTCCAACAGAACTCCCAGTAGAGTCGCCTGAATACTCTAACAACGTTTAA 1917 0.4111 MDVQYPPVVAPPHKSSLQKFKVKLKETLFPDDPMRQFKGQPFGTKIVLAAQYVFPILQWLPQYSLKLFKSDIISGITIASLSIPQGISYAKLAGLPPSFGLYSSFVPPLVYAVLGSSKDLAIGPAAITSLVLRSMLTQGVSATSQPQLFLQLAFTSTLFAGVFQAALGILRLGFIIDFLSKAILVGFMAGVAVIVSLQQLKSLLGITHFTKKMTIVDVLSSVFSNIHEWSWQTIVMGAGFLILLLLARQFSLKKPKYFWVSAGAPLLSVITSTAILFAIRGKHPAILVIGKLPEGVNPPSVKMLYFEATHLGLAIKTGIIVGILSLTESIAVGRTFAAIRKYKVDGNKEMIAIGLMNVIGSTTSCFASTGSFSRTAVNHNAGAKTAMSNIVMSVAVLVTLLFLMPLLHYTPHVVLGAIIVTAVIGFVDIPAAYRIWKIDKFDFVVMLTAFFGVIFISVEYGLALAVGLSILRILLQITRPKTVMLGNIPGTRLYRDLHHYNQATRIPGFLILSIEAPINFANITYLQQRTLRWIEEEEESMKDNSVFRFVILEMSGSYIIILALVNPLAEVIEKLTKADESDSFIREDYLFLSVGEAVGKLSSIMENSPSVTMQQEQPPYMSPPTELPVESPEYSNNV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01568 638 Gene3D STAS domain 479 602 IPR036513 -
Aip04g01568 638 TIGRFAM sulP: sulfate permease 55 556 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip04g01568 638 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
Aip04g01568 638 MobiDBLite consensus disorder prediction 608 638 - -
Aip04g01568 638 ProSiteProfiles STAS domain profile. 499 575 IPR002645 -
Aip04g01568 638 Pfam Sulfate permease family 68 448 IPR011547 GO:0016021
Aip04g01568 638 PANTHER BNAA09G30120D PROTEIN 8 603 IPR030313 -
Aip04g01568 638 Pfam STAS domain 500 556 IPR002645 -
Aip04g01568 638 PANTHER SULFATE TRANSPORTER 8 603 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01568 Aip-Chr4 36860158 36869839 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01568 3 603 Inorganic Solute Cotransporters AT3G15990 59.551 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01568 K17471 - gmx:100779433 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01568 04 36860158 36869839 Aip04g01568 04 36860158 36869839 ECH