Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01567 ATGGAAATCAGTGGCACCCACAATGGGAGTAGCATGATGTGGTTCTTCAAGGATCGAGGGTTTGATGATAACAGCATACATGGAATTTTCAGAAAGTGCAAACGCCTAGAGAGTGTTCACAAAGAGAGAGCAAATGAGAATTGGGAATACTTGAGAACCATTGGAATTCAAGAGAGGAAGATTCCTTCCATTGTTTCGAAATGCCCCAAGATCCTGGCCCTCGACCTCAACGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACACTAGGAACAAAACCCCATGAAGTCACCTCTGCCATTGCCAAGTTCCCTCACATACTCTCGCACAGCGTCGAAGAGAAGCTCTGTCCCCTCTTGGCATTCTTTCAGGCATTAGGCATACCCGAGAAGCAAATTGGGAAAGTGATACTGATCAATCCTCGGCTTATCAGCTACAGCATTGAAACAAAGTTGAAAGAGATTGTGGACTTCCTTGCTAGCCTTGGTCTTGATAAAGATGGAATGATTGGAAAAGTCATAATGAAGTTCCCGTTTATAATGGGTTATAGTGTTAACAAGAGGCTCCGGCCGACTTCAGAGTTTCTGAGGTCGATAGGCCTAAGTGAGTTAGATCTTCAGGCTGTAGCTATGAACTTCCCTGCAATCTTAAGTAGAGATGCAAAAAAGGCTTTGGTGCCCAATTATGATTTCTTAAAGAAATGTGGATTTCAAGACCCACAAATATCTGCTTTGGTTGTTGGTTTTCCTCCTATCTTGATCAAGAGCATACAGAATTCTTTAGAGCCAAGGATTAGGTTTTTAGTGGACGTGATGGGGAGACAAGTCGATGAAGTCATTGATTATCCTTGCTTCTTTCGTCATGGCCTCAAAAGAAGGTTAGAGTCGCGGCACAAACTTCTAAAGCAGCGGAACCTAGATTGTAGCTTGAGTGAAATGCTGGCCTATAATCAGAAGAAGTTCAACATGAAGTTTGGCTTGTTAAAATTGAGTAACTAA 999 0.4294 MEISGTHNGSSMMWFFKDRGFDDNSIHGIFRKCKRLESVHKERANENWEYLRTIGIQERKIPSIVSKCPKILALDLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQIGKVILINPRLISYSIETKLKEIVDFLASLGLDKDGMIGKVIMKFPFIMGYSVNKRLRPTSEFLRSIGLSELDLQAVAMNFPAILSRDAKKALVPNYDFLKKCGFQDPQISALVVGFPPILIKSIQNSLEPRIRFLVDVMGRQVDEVIDYPCFFRHGLKRRLESRHKLLKQRNLDCSLSEMLAYNQKKFNMKFGLLKLSN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01567 332 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 11 328 - -
Aip04g01567 332 Pfam mTERF 15 123 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 Pfam mTERF 104 321 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 PANTHER CGI-12 PROTEIN-RELATED 11 328 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Aip04g01567 332 Gene3D Transcription termination factor 3, mitochondrial 104 331 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01567 Aip-Chr4 36805898 36807497 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip04g01567 mTERF 7.5e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01567 K15032 - gmx:100816929 546.584