Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01566 ATGGAACATAACAATAACAACAATATTATTTTGCATTCTCATTGTGTAGAAGTGGCAATGGAAGAAGTGCACCATGTTGTGGCTCCACCACACAAGAGCACCTTCCAGAAGCTCAAGGCTAGGCTCAAGGAAACATTCTTCCCTGATGATCCTTTGAGGCAATTCAAGGGACAACCTTTGAAGACCAAATTTGTTCTTGGAGCTCAATATTTCTTCCCTATTCTTCAATGGGGTCCTAATTATACCTTCCAACTCTTCAAATCTGACCTTATCGCTGGCCTCACCATTGCTAGTTTGGCCATCCCTCAGGGAATCAGTTATGCAAAGCTTGCAAACCTTCCTCCAATTGTGGGACTATATTCTAGCTTTGTTCCGCCACTTGTTTATGCTGTGCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCAGTTTCAATTGCTTCTCTTGTTCTTGGATCCATGTTGAGGCAAGAAGTGTCTCCAACAACAGACCCTCTTCTCTTTCTTCAGCTTGCTTTCACTTCTACCTTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGGATTCTAAGGCTTGGGTTTATCATTGACTTTTTATCAAAGGCCATACTTATTGGTTTCATGGCTGGAGCAGCTATAATTGTTTCACTGCAACAACTTAAGAGCCTCCTTGGAATCACACATTTCACTAAACAAATGGGCCTGGTTCCAATTTACAAGGCCATTAAGACAACGTTAAAAGATGAAATCTTCATGGAAGGAGAAATCAAACACCTGTTTGCTCTTCACTTCAGAGTTCAGGCTTTAATTCCTATGACCGAATTTAAACATGCCACAAGTATAAGAAAACCAAAACTTTTCTGGGTCTCAGCTGGTGCTCCTCTTGTATCTGTTATCATCTCAACTATCTTGGTTTTTGCAATTAAGGGCCAAAACCATGGCATCAGTGTAATTGGAAAACTGCAAGAAGGAATAAATCCTCCTTCTTGGAACATGTTGCGGTTTCATGGAAGTCATCTAGGCCTTGTCATAAAAACTGGGATTATCACAGGCATTTTATCCCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCTCTCAGAAACTACAAAGTGGATGGTAATAAAGAAATGATGGCCATCGGATTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCATTCTCTCGCTCAGCGGTTAATAACAATGCTGGGGCGAAATCAGCCGTGTCGAATGTAGTGATGTCTGTGACAGTCATGGTGACCCTCCTTTTCCTTATGCCATTGTTCCAATACACGCCTAATGTTGTGTTGGGTGCAATCATAGTCACGGCGGTGATCGGTCTCATTGATATCCCTGCTGCTTGCCTCATCTGGAGGATCGACAAATTCGATTTCATTGTTATGTTGACCGCATTCTTTGGTGTTATTTTCATCTCTGTCCAGCATGGACTTGCTCTCGCAGTTGGATTATCAACATTTAAGATCTTACTGCAAATTACAAGGCCTAAAACAGTTATGTTGGGAAAGATACCAGGGACAGACATATATAGAAATCTTCATCAGTATAAGGAAGCTGTGAGAGTACCTGGTTTTCTCATTTTAAGCATTGAAGCTCCCATCAATTTCGCTAACATAACATACCTCAACGAAAGGACGTTACGATGGATTGAAGATGAAGAAGACAACAAAAAGGAATACTCAAGCCTTCAATTTGTGATCCTGGAAATGTCAGCTGTGAGTGCCATCGACACAAGTGGAATTTCACTTTTCAGGGATTTGAAAGCAGCATTGGAAAAGAAGGGAATTGAGCTTGTGCTGGTGAATCCACTCGCCGAGGTCATAGAAAAGCTGAAAAGAGTAGATGAAGCCGATGAATTCATACCAGCACAAAACCTGTTCTTGACAGTTGGAGAGGCCGTAGCTTCACTTTCAACAGCAATGAAAAACCAATCAACCATCCCAGAGGGAGCACACACAATTATGCCACATTACTGA 2010 0.4204 MEHNNNNNIILHSHCVEVAMEEVHHVVAPPHKSTFQKLKARLKETFFPDDPLRQFKGQPLKTKFVLGAQYFFPILQWGPNYTFQLFKSDLIAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTTDPLLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKQMGLVPIYKAIKTTLKDEIFMEGEIKHLFALHFRVQALIPMTEFKHATSIRKPKLFWVSAGAPLVSVIISTILVFAIKGQNHGISVIGKLQEGINPPSWNMLRFHGSHLGLVIKTGIITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKSAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACLIWRIDKFDFIVMLTAFFGVIFISVQHGLALAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPGFLILSIEAPINFANITYLNERTLRWIEDEEDNKKEYSSLQFVILEMSAVSAIDTSGISLFRDLKAALEKKGIELVLVNPLAEVIEKLKRVDEADEFIPAQNLFLTVGEAVASLSTAMKNQSTIPEGAHTIMPHY 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01566 669 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Aip04g01566 669 Pfam STAS domain 527 644 IPR002645 -
Aip04g01566 669 Gene3D STAS domain 506 651 IPR036513 -
Aip04g01566 669 TIGRFAM sulP: sulfate permease 73 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip04g01566 669 Pfam Sulfate permease family 86 475 IPR011547 GO:0016021
Aip04g01566 669 ProSiteProfiles STAS domain profile. 526 648 IPR002645 -
Aip04g01566 669 PANTHER SULFATE TRANSPORTER 22 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip04g01566 669 SUPERFAMILY SpoIIaa-like 532 648 IPR036513 -
Aip04g01566 669 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Aip04g01566 669 PANTHER BNAA09G30120D PROTEIN 22 650 IPR030313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01566 Aip-Chr4 36799202 36804979 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01566 22 653 Inorganic Solute Cotransporters AT3G15990 62.637 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01566 K17471 - gmx:100819130 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01566 04 36799202 36804979 Aip04g01566 04 36799202 36804979 ECH