Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01526 ATGCTTGTTAGTAGCGGCAATAGCCAAAGACTCAGACAAATCTCATGTCCACCAAGAATGGCTTACCGGACACTGCCATCTATGGCTGCTTCATCGTCATCTTCGTCTTCCAAAaaacacgatgtttttatcagttttagaggcgaggacacacgcaacaacttcacaagccatctttgtgctgctcttaaccaaagcaagatacaagtcttcatagacaacagaatttccaagggagatgagaactcttcctcaatcttcaaagccataagggattccaatgtgtccgtggttgttctgtcaaaggactacgcttcctcgacgtggtgcatgcgtgaactcaccaaaatactcgagcaaaagaaacatggtaagggccacattgtggtacctgtgttctataagattgacccttcacatgttaggaagcaaattggcacttataagaaagcatttgagaaacatgagagagatgtcaaacacaacattctgctgaaatggaaatctgctctgactgaagtagccaatttagttgggtgggatTCACAGAATTACAGGATCGAATCTGAACTCGTTGAGGAAGTTGTCAAAGATGTTATGCAAAAACTGAATTGCATATATCCCCCTGAAGTGAAAGATCTTGTTGGAATTGACCAAAATCTTGCTCCCATTAAATCCTTGTTGAGAATCAGGTCAAGAgaagttcgaataataggaatttggggcatgggcggaataggtaaaacaaccattgccaaagccttgttttccaaactatcttctcaatatgaaggtagctgcttcttggagaatgtaagggaaGAATCAGAACAGCATTTGCTGAATAAACTTCTTTCTGAGGTACTAGAGGATGCAAATCACTATTTCGGCACACCTATAGCAAGATCCACCTTTTTTATGAGGAGGCTTAGCCGAAAAAAGGTGTTAATAGTGCTTGATGATGTTGACAATCCGAAGAAGCTCGAAGTTCTTGCTGCAAAACATAATTTCTTGGGACCAGGCAGTAGAGTCATTGTCACAACTAGAGATAAGCATGTCCTTAGCAAAGGGGTCGATGAAATATACGAGGTCAAAGGATTGCCCCTTCATCATGCTATTCGGCTTTTTAGTTTAAATGCCTTTGACAAAAGCTATCCTGAATCAGGTTTTGTGATGCAATCTAAAATGGTGGTTGATtatgcaaatggcaatccattggctttaaaagttttaggctcattccttcattctagaaatctgcaacaatggaacagtgctctgagaaaactcacaaaaattccaaatacggagattcagaatgtgttgaggtggagttatgatggattagatgatgatgaacagaagaatatgtttctggacattgcatgctttttccaaggagagaagaaagaaactgttacaaggctacttgatatttgtggtttctatgcagatattgggataagaatcctgcaggacaaagctctaataacattttcagatgcaaatgaattacacatgcatgatttgatacaagaaatgggtttggaaattgttcgtcaggaatcaaccaaagaccctggaaggcgcagccggttgtgggatcccgaggaaatctatgatgtactgaaaaatgataggGGAAGTGATGCAGTTGAAGGCATAATGTTAGATGTGTCGCAAATGAGAGTCTTGAACTTGAGCTATGAGAGCTTCTCAAGGATGACCAGTCTAAGATTCATCAAATTCTATATGAGTAGGGGTAGGACATGCAATCTGTTCCTTCTTTCaggtcttgaatcattgtctagtaaattgaggtacctccaatgggatggatacccttccaagtctttgccatcgaccttttctccggacaaccttgttgtgctttccatgatgggaagccatgttgaaaaactatgggatggagttaagAGTCTTCCAGGCTTGAAAGAGATCAACCTTCGCGCCTGCAGCAATTTAACCAATCTCCCCGACTTATCTCTAGCGCCAAATCTTGAAAGGGTAGATCTTTCTCTTTGTACAAGTCTGCTTTGTGTTCCCACATCTATCAAGTATACCAACAAACTTCTTTTGTTTAACCTGGAATCCTGCAAAAATCTGAAGAGTCTTCCAAGAAACATTCACTTATTTTCTCTTCAAATGTTCATTCTCAAAGGCTGTTCAAGTCTTGATGAGTTTTCATTGACTTCAGAGAACATGACACGCCTGGACTTAAGAGGGACAGATATTGAACATTTTCCAGAATCACTTTGGCAACTTCTTAACCAGCTGGTTTACTTGAATCTGGAATCCTGTGCTAAGCTTAAGAGTCTCACAAGCAACATTCACTTGGTATCTCTACAAAGGCTCAATCTTAGAGATTGTTCAAGCCTTGAAGTTTTCTCTGTGACTTCGGAGAACATGGAATACCTGAATTTGGGAGGAACATCAATTAAAGGATTGCCAACATCAATTTGGCGAAACAATAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAGACTTGTGAATTTTCCAGACAAGCCGAAACTTGGTGAATTGTCTCTTACTTTCAATGAGCAAAACTCTTTTGAAGGTCCAACTGTGGATGAACCATGGAATTTGTCATCCTTATCAGATTTATCACTGAAAGGAAGCGGTATTGTGAACTTACCTGCAAGCATCAAAGATCTTCCAAGACTGAAAAAACTTACCTTGATGGATTGCAAGAAGCTTCGGTCTCTACCAAGCCTTCCATCATCTTTGGAAGACTTATCCCTTGATGAAAGAAATATTGATTTTTTACCTGTAAATATCAAAGATCTTTCTCATTTGAAAAAGCTTACCATAATTAACAAGAAGAGGCAGTTTTCTCCACCGGAGCTTCCACCATCCTTGAAAGATATATTCCTAAATGAAAGTAAAGTTGATTCCTTGCTTCTGAGCATGAAAGATCTTTCTCATCCACAAAAGTTTCCTTTGATAAAGTGTAAATGGCTTCATCCTCTACTTGAGTTTCCGCCATTTTTGGAAGATTTATCAATAAATGAAAGCAATATTGAGTGCCTGCCCGTTAGCATAAAAGATCTTTCTCACCTGAGAAAACTATCCTTAATAGAGTGCCAGAGGCTTCGGTACTTGCCAGAGCTTCCCCGATCTTTAGAACATCTGTCTGTAAATGGCTGTAACATTGAGAGCTTGCCAAGGAACATCAAAGATCTTTCTCATTTGCAAACCATTACCTTAGTCGATTGCAAGAGGCTCCGGTCTGTACCAGAACTTCCACCATGCCTGCAATCTTTTTGTGCAGCAGATTGCAGATCACTTGAGATTGTTCCAAGTTCAAGGACTATCTTGATGGAAGAGAGGATTGCCTTTTATTACAATTGCATAAACTTGGATCAGAATTCGCGCAACAACATCATTGCAGATGCCCCCTTCGAGGCAGCTTTTGCTTCCTTGAAAGAAAGAACACCTCTTGGTCCTTTGATATCCATATGTCTGCCAGGAATTGAAATCCCAGACTGGTTCAGTTACCAAACACCGAATTCTGCATTGAACATAGAAATTCCTCAACAGTGGTTCATTGATTCGAAGTTCTTAGGCTTTGCTCTATGCCTTGTAATTGGTGGTTCTCATCAAAACAGCAATGAAGGCTATGATCCAGATATTAATTGTTATCACTTTGTAAAGCCTGCTGGCAACTCTGATCCCAATGATCGTTTTCTTGGACATTGCACAACTATAATGCAGGTGCCGTGGGGTTTCAATTCAGATCATATATTCATATGCTACTATCCAGCTTTCAATGTTCCCATCATGCAAGATTTCAAGGACTTAGCCAAGTACTATGATGCAAACAGCCTGAATCTCAGGGTCATTTTTAAATTTAAGGGTCCATCTCAAAGGTTGGACCTTGTGAAGAAGTGTGGAGTCAGACCACTATTGATTGCTAATACTAAAAGGATTCACATTGAGACTTGA 3990 0.2837 MLVSSGNSQRLRQISCPPRMAYRTLPSMAASSSSSSSKKHDVFISFRGEDTRNNFTSHLCAALNQSKIQVFIDNRISKGDENSSSIFKAIRDSNVSVVVLSKDYASSTWCMRELTKILEQKKHGKGHIVVPVFYKIDPSHVRKQIGTYKKAFEKHERDVKHNILLKWKSALTEVANLVGWDSQNYRIESELVEEVVKDVMQKLNCIYPPEVKDLVGIDQNLAPIKSLLRIRSREVRIIGIWGMGGIGKTTIAKALFSKLSSQYEGSCFLENVREESEQHLLNKLLSEVLEDANHYFGTPIARSTFFMRRLSRKKVLIVLDDVDNPKKLEVLAAKHNFLGPGSRVIVTTRDKHVLSKGVDEIYEVKGLPLHHAIRLFSLNAFDKSYPESGFVMQSKMVVDYANGNPLALKVLGSFLHSRNLQQWNSALRKLTKIPNTEIQNVLRWSYDGLDDDEQKNMFLDIACFFQGEKKETVTRLLDICGFYADIGIRILQDKALITFSDANELHMHDLIQEMGLEIVRQESTKDPGRRSRLWDPEEIYDVLKNDRGSDAVEGIMLDVSQMRVLNLSYESFSRMTSLRFIKFYMSRGRTCNLFLLSGLESLSSKLRYLQWDGYPSKSLPSTFSPDNLVVLSMMGSHVEKLWDGVKSLPGLKEINLRACSNLTNLPDLSLAPNLERVDLSLCTSLLCVPTSIKYTNKLLLFNLESCKNLKSLPRNIHLFSLQMFILKGCSSLDEFSLTSENMTRLDLRGTDIEHFPESLWQLLNQLVYLNLESCAKLKSLTSNIHLVSLQRLNLRDCSSLEVFSVTSENMEYLNLGGTSIKGLPTSIWRNNKLFTLVLHSCKRLVNFPDKPKLGELSLTFNEQNSFEGPTVDEPWNLSSLSDLSLKGSGIVNLPASIKDLPRLKKLTLMDCKKLRSLPSLPSSLEDLSLDERNIDFLPVNIKDLSHLKKLTIINKKRQFSPPELPPSLKDIFLNESKVDSLLLSMKDLSHPQKFPLIKCKWLHPLLEFPPFLEDLSINESNIECLPVSIKDLSHLRKLSLIECQRLRYLPELPRSLEHLSVNGCNIESLPRNIKDLSHLQTITLVDCKRLRSVPELPPCLQSFCAADCRSLEIVPSSRTILMEERIAFYYNCINLDQNSRNNIIADAPFEAAFASLKERTPLGPLISICLPGIEIPDWFSYQTPNSALNIEIPQQWFIDSKFLGFALCLVIGGSHQNSNEGYDPDINCYHFVKPAGNSDPNDRFLGHCTTIMQVPWGFNSDHIFICYYPAFNVPIMQDFKDLAKYYDANSLNLRVIFKFKGPSQRLDLVKKCGVRPLLIANTKRIHIET 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01526 1329 Gene3D Ribonuclease Inhibitor 719 851 IPR032675 -
Aip04g01526 1329 Gene3D Ribonuclease Inhibitor 554 718 IPR032675 -
Aip04g01526 1329 Gene3D - 203 363 IPR027417 -
Aip04g01526 1329 PRINTS Disease resistance protein signature 237 252 - -
Aip04g01526 1329 PRINTS Disease resistance protein signature 309 323 - -
Aip04g01526 1329 PRINTS Disease resistance protein signature 401 415 - -
Aip04g01526 1329 PRINTS Disease resistance protein signature 898 914 - -
Aip04g01526 1329 Pfam Leucine Rich Repeat 627 646 IPR011713 -
Aip04g01526 1329 Pfam C-JID domain 1170 1315 IPR045344 -
Aip04g01526 1329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 461 IPR027417 -
Aip04g01526 1329 Pfam NB-ARC domain 225 436 IPR002182 GO:0043531
Aip04g01526 1329 Gene3D - 367 450 IPR042197 -
Aip04g01526 1329 SUPERFAMILY L domain-like 808 1108 - -
Aip04g01526 1329 ProSiteProfiles TIR domain profile. 38 203 IPR000157 GO:0007165
Aip04g01526 1329 Gene3D Ribonuclease Inhibitor 978 1119 IPR032675 -
Aip04g01526 1329 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 180 IPR035897 -
Aip04g01526 1329 Gene3D - 36 202 IPR035897 -
Aip04g01526 1329 SUPERFAMILY L domain-like 508 848 - -
Aip04g01526 1329 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 761 - -
Aip04g01526 1329 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 762 927 - -
Aip04g01526 1329 Pfam TIR domain 39 208 IPR000157 GO:0007165
Aip04g01526 1329 Gene3D Ribonuclease Inhibitor 852 965 IPR032675 -
Aip04g01526 1329 SMART till_3 39 177 IPR000157 GO:0007165
Aip04g01526 1329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 761 IPR044974 GO:0006952
Aip04g01526 1329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 762 927 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01526 Aip-Chr4 34557993 34562248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01526 35 827 WRKY Transcription Factor Family AT4G12020 37.576 1.21e-126 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01526 - - ahf:112742518 2229.14