Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01517 ATGGGTGAGGAGAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGAAAGTGTTGGTGCCACTGCTGTTGTTGGTGATGGAGAGGAGGAAAAGAATAAGAAGATGAAGAAGAGTAAGAAGCAGGGGTTAATTTCTCGAATTTGGAAAGGGATATTCAGAAGACGTAGTGATGATTTTGAGAAGAGGCTGCAGTATATTTCCAAAGAGGAAGCTGCGGTTATGGCCAGGGTCAATCGGAGTAATCGGTCGTGGCAGAGAACTTCACGCCAGATCATAATAATTTTTGTTATATTTGAGGACGACGAGAGTCTAAGGAGATGGAAGGAACAACTTCTTGGGAATGTGTATGTGAACAATGTGACAGAGGTTCTGGAACCAGAAGTGAAAATAATAAGCCTTTCAATAGTGTCACCTGGAAGAGAGGACATAGTGCTTCCAATACCTGAGAATGGGAATCCAAAGGGTCTATGGACTGAGAATCAAGATGCTATAGATGCTGCAATTATTGGTGCTCTGTGCAGGGACCGTAGGAAACAAGTGTACTTGGGTGAATTTGACACAACACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTGGCATTGATGCAGATATTAATTTCAACGTTGGAATTGAAATGCAGAGAAAAGCAGCATTGCCGTTGAGGGACGCAAAAAGCGGCAATGCGAACAAGATGAGGGCTCTGTGCAGCAAGGAAGCTTTGGTGAAGCTTCTGTGA 753 0.4409 MGEENKVVGEGEKKKEESVGATAVVGDGEEEKNKKMKKSKKQGLISRIWKGIFRRRSDDFEKRLQYISKEEAAVMARVNRSNRSWQRTSRQIIIIFVIFEDDESLRRWKEQLLGNVYVNNVTEVLEPEVKIISLSIVSPGREDIVLPIPENGNPKGLWTENQDAIDAAIIGALCRDRRKQVYLGEFDTTHAAARAYDRAAIKFRGIDADINFNVGIEMQRKAALPLRDAKSGNANKMRALCSKEALVKLL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01517 250 SUPERFAMILY E set domains 100 155 IPR014756 -
Aip04g01517 250 Pfam RHO protein GDP dissociation inhibitor 100 154 IPR000406 GO:0005094|GO:0005737
Aip04g01517 250 SUPERFAMILY DNA-binding domain 176 214 IPR016177 GO:0003677
Aip04g01517 250 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g01517 250 PANTHER RHO GDP-DISSOCIATION INHIBITOR 26 159 IPR000406 GO:0005094|GO:0005737
Aip04g01517 250 Pfam AP2 domain 176 205 IPR001471 GO:0003700|GO:0006355
Aip04g01517 250 ProSiteProfiles AP2/ERF domain profile. 153 213 IPR001471 GO:0003700|GO:0006355
Aip04g01517 250 SMART rav1_2 171 219 IPR001471 GO:0003700|GO:0006355
Aip04g01517 250 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1 26 159 - -
Aip04g01517 250 MobiDBLite consensus disorder prediction 1 39 - -
Aip04g01517 250 Gene3D AP2/ERF domain 154 214 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01517 Aip-Chr4 33801177 33803182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01517 179 214 AP2-EREBP Transcription Factor Family AT2G39250 77.778 4.11e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01517 K12462 - aip:110271490 416.772