Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01509 ATGAAGCTCTCCTTTTCGATACCCTCGAAGTCCTCTTCCTCCTCCAAACCCATCAAACTCGACGACTCCTCCAAAAACGGCGCGGCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCGCCAATCGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATCACTGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGAACGATTCCAATGCCGCGGATGCAGAACTCGGCACCGACATGTCCTACGGTCTCAACCTGCGCCAAGCCGCGGAGAAAAATGGCAAAACCGGTGAACTCGCTGATGATGAGGATGATAGGGTTCCGCGTCAACGGCCGGAGGTGGCGTTGCTGCAGAAGTTTAAGGACGACTTGAAGCGGCTGCCTGATCACCAGGGGCTCGAGGAGTTCAATGATGTCCCTGTTGAGGGTTTCGGCAAGGCCTTGCTTGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGAGGAATGCCAAGGAGGACGTTAAGGTTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCGATGATCGCAGTTCTGTTCGGAGCCAGAAGAAGAAAAGCAGGGAAGACAATGGGAGAAATGATGCAGGTTTTGTTAGTGAGAAGAAGATTGTGAGGATTATTGGGGGAAAAGATGCTGGATTGAAGGGTATTGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAAGAAGTGGAGGCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGAGGTGCTTGAGGAAATTGAAGGAGCTGAGGATTCGGCACAAGGGTGAAGATGACAAGGCTTCAAGGCATAAGCGTGAGAGAGAGCGAGGCGGGGTTGAGAAGACAACTCGAGCGGAAGCTAATGGGGGTGATCAGCAGCGGGGAAGGAAACAGGTTTCTTGGCTCACAAGTCACATTCGAGTTAGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAGGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACCGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAGTATAAGGGCGCCTTTGGGAGCCTGGTTGAGAGGGATTTGGATCGGGAAGTTGGTGTTGTTCGGGATGCTGATACTCATCAGCTGCTAAATGTGAAGCTTGAACAGATTGCAGAGTCTTGTTTCGGTCCCTTCTGGACCAATCAAAGGTGCCACACAGCAGGACTAGCTAATTGTAGCGCACACCAAGATGATTTATACATTAATGCTGCCCATGACTTCCTGAAGCTGGTGAAGGTGGAGGTTCAAGTGAGGTAG 1494 0.5094 MKLSFSIPSKSSSSSKPIKLDDSSKNGAAPSKHFVTEFDPSKPPIEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFENDSNAADAELGTDMSYGLNLRQAAEKNGKTGELADDEDDRVPRQRPEVALLQKFKDDLKRLPDHQGLEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKVVEYKRRTAKEGLGFVGDDRSSVRSQKKKSREDNGRNDAGFVSEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVEARVSVDDVAELGSAEEERCLRKLKELRIRHKGEDDKASRHKRERERGGVEKTTRAEANGGDQQRGRKQVSWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLVERDLDREVGVVRDADTHQLLNVKLEQIAESCFGPFWTNQRCHTAGLANCSAHQDDLYINAAHDFLKLVKVEVQVR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01509 497 MobiDBLite consensus disorder prediction 109 128 - -
Aip04g01509 497 Gene3D - 346 400 - -
Aip04g01509 497 MobiDBLite consensus disorder prediction 302 338 - -
Aip04g01509 497 Pfam G-patch domain 147 204 IPR026822 -
Aip04g01509 497 SMART G-patch_5 158 204 IPR000467 GO:0003676
Aip04g01509 497 MobiDBLite consensus disorder prediction 1 60 - -
Aip04g01509 497 PANTHER G PATCH AND KOW-CONTAINING 1 453 IPR045166 GO:0000398
Aip04g01509 497 MobiDBLite consensus disorder prediction 113 128 - -
Aip04g01509 497 MobiDBLite consensus disorder prediction 302 323 - -
Aip04g01509 497 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Aip04g01509 497 MobiDBLite consensus disorder prediction 209 226 - -
Aip04g01509 497 MobiDBLite consensus disorder prediction 1 21 - -
Aip04g01509 497 MobiDBLite consensus disorder prediction 203 226 - -
Aip04g01509 497 SMART kow_9 400 427 IPR005824 -
Aip04g01509 497 SMART kow_9 229 256 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01509 Aip-Chr4 33330826 33333014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01509 342 428 C2H2 Transcription Factor Family AT1G55460 33.333 2.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01509 K13101 - gmx:100784983 474.937