Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01508 ATGCTGCTTGTAGTGAAGCTGAAATTGAGAAGGCACTTCAGGCTGGTGAACAACTTGTTTTGTGTTAATCAGGATACACGTTTGAACTTTAGAATACTTGACCTCAGAACCCGGCTAATCAAGGAATTTTCTCCATTAGATTCCTTCACACACAGACATCTGTGTGAGTTTACTGGTCTTGATGTTGAAACGGAGATTAAGAAGCATTATCACGAGGTTATGGATATAGTTGATAGGTTGTTTGTCTCAATATTTGATAGCTTGAACCAGAATTGTAAGAGGGACCTTAAAGCTGTGGCACAAAGTAGAATGGAAGAAGATGAAGAAGAAGAAAAAGAGAGAAATAGCTACATCAGAGATTATTTATCATGGGGtggcctccgctcttggtgtactgccctcgataagatctctccttacacctccgccgtcggcatcgtcgtctccatcggtgtctcagttctcggtgttgcttgGGGGATTTACATAACTAGTAGCAGCTTGATCGATATTGCAATCAAGACTCCCCGAATCACTTGCACGAATCTCATTAGGATAATTTTTTCGTACTGGTAA 576 0.316 MLLVVKLKLRRHFRLVNNLFCVNQDTRLNFRILDLRTRLIKEFSPLDSFTHRHLCEFTGLDVETEIKKHYHEVMDIVDRLFVSIFDSLNQNCKRDLKAVAQSRMEEDEEEEKERNSYIRDYLSWGGLRSWCTALDKISPYTSAVGIVVSIGVSVLGVAWGIYITSSSLIDIAIKTPRITCTNLIRIIFSYW 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01508 191 Pfam tRNA synthetases class II (D, K and N) 48 106 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aip04g01508 191 Gene3D Bira Bifunctional Protein; Domain 2 41 123 IPR045864 -
Aip04g01508 191 SUPERFAMILY Class II aaRS and biotin synthetases 49 100 IPR045864 -
Aip04g01508 191 SUPERFAMILY F1F0 ATP synthase subunit C 142 188 IPR035921 -
Aip04g01508 191 Gene3D - 138 190 IPR035921 -
Aip04g01508 191 PANTHER ASPARTYL-TRNA SYNTHETASE 47 107 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01508 Aip-Chr4 33317399 33330776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01508 104 188 Primary Pumps ATPases(2) AT2G25610 55.556 3.30e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01508 K22503 - gmx:100788164 102.064