Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01501 ATGAGTGACGGCGTGTTTGTGATAGAAGAGGAGAAGAATGCAAGGCGTAGAGCAGATGAGCAGTTGCAGGAAGCAAAGGTTGCAAGAAGCAAAGGATCATTGCTATCATTGTTGTTTATGGCTGTGGAaaaagagaaagCCCCGCCTCAAACTCCTCTTTCAGACATGGAAGGCAGCAGCAGCAATGGTGGTAGCGGGAAACGCGAGGAAATTGTGGACGTTGGATCGGTTGTTGAAGCTGTTACTGCAGAGGAAGGTGATGCTCCCCTCTACAACGTTGAGAGCCTCTGCATGCGTTGCGGTGAAAATGGGATTACAAGATTCTTACTCACCTTAATTCCTCACTTCAGAAAGATTTTGTTGTCAGCTTTTGAGTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCGCGTGGTTGCTGTTACACTCTGCAGATCCCATCTGACAATCCAAAGATGCTTGACAGACAAGTGGTAAAATCAGAATCTGCTACCATTAAGATTCCAGAGTTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTTTCAACGAAAGTGTCTCCAGAGACAGCTGAAGCCATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCTACTGGAGAGTCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTTGTTGAAAATCCGTTTGCACCATCATCTGATCCATCATTGACCATCAAGTTTTATGACCGAACCCCTGAGCAACAAGCATTGTTGGGATATCTTGTTGATTCTACACAGATTGAAGGAACTCGCAATGAAGCACAAGCAGGGGGAAATGCTGTGGTTACTGATCAAGTGAGGGGAGAGCCACATGGATCTGTAGGGGCAACTGCTGGTCATCGAGCCATTGCACAGAGTAGTAGTTCAGAAATTGCGGAAGCCTTATTTCGATACACTGCACCGGAAGAGGTGATGACTTTCCCTTCAACTTGTGGTGCTTGTGCCACTAAGTGTGAGACTAGAATGTTTGTCACCAATATTCCATACTTTCAAGAAGTAATCGTAATGGCATCCACATGTGACTCTTGTGGCTACCGCAACTCCGAGTTAAAACCAGGTGGACGAATTTCTGAAAAAGGCAAAAGAATTTCACTTCATGTGAAAAATGTTAACGACTTAAATCGTGATGTAATCAAGTCTGATACTGCAAGTGTAAAAATTCCTGAACTTGAATTGGAATTGGCAAGTGGCACCCTTGGGGGTTTGGTTTCAACTGTTGAAGGTTTGATTACAAAAATTAACGAAAGCCTTCAGAGGGTCCATGGATTTACTTTCGGTGATAGTTTGGATGAAAATAGAAAAAGCAAGTGGCTAGATTTTAAAGAAAAGCTAGACAAGCTTCTTAGCTTGGAAAAACCTTGGACTTTAATTCTTGATGATGCATTAGCCAATTCCTTTATAGCACCTGCAACTGATGATTTAAAAGACGACAATCAATTAACGTTTGAGGAGTATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGCTTGAATGATATGGATACTTCTGCTGCCGATGTTGCTTACGAATCAGCAAATAATACTAAAGTTGAATGA 1623 0.427 MSDGVFVIEEEKNARRRADEQLQEAKVARSKGSLLSLLFMAVEKEKAPPQTPLSDMEGSSSNGGSGKREEIVDVGSVVEAVTAEEGDAPLYNVESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYTLQIPSDNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTKVSPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFVENPFAPSSDPSLTIKFYDRTPEQQALLGYLVDSTQIEGTRNEAQAGGNAVVTDQVRGEPHGSVGATAGHRAIAQSSSSEIAEALFRYTAPEEVMTFPSTCGACATKCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRISEKGKRISLHVKNVNDLNRDVIKSDTASVKIPELELELASGTLGGLVSTVEGLITKINESLQRVHGFTFGDSLDENRKSKWLDFKEKLDKLLSLEKPWTLILDDALANSFIAPATDDLKDDNQLTFEEYERSWEQNEELGLNDMDTSAADVAYESANNTKVE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01501 540 SMART zpr1 331 491 IPR004457 GO:0008270
Aip04g01501 540 SMART zpr1 95 235 IPR004457 GO:0008270
Aip04g01501 540 Pfam ZPR1 zinc-finger domain 198 234 IPR004457 GO:0008270
Aip04g01501 540 Pfam ZPR1 zinc-finger domain 95 193 IPR004457 GO:0008270
Aip04g01501 540 Pfam ZPR1 zinc-finger domain 331 489 IPR004457 GO:0008270
Aip04g01501 540 PANTHER ZINC FINGER PROTEIN ZPR1 70 533 IPR040141 -
Aip04g01501 540 Coils Coil 8 31 - -
Aip04g01501 540 Gene3D ZPR1, zinc finger domain 87 140 IPR042452 -
Aip04g01501 540 Gene3D ZPR1, zinc finger domain 321 376 IPR042452 -
Aip04g01501 540 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 332 523 IPR004457 GO:0008270
Aip04g01501 540 MobiDBLite consensus disorder prediction 46 69 - -
Aip04g01501 540 Gene3D ZPR1, A/B domain 377 519 IPR042451 -
Aip04g01501 540 Gene3D ZPR1, A/B domain 141 262 IPR042451 -
Aip04g01501 540 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 70 533 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01501 67 539 C2H2 Transcription Factor Family AT5G22480 71.053 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01501 K06874 - gmx:100798741 800.045