Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip04g01500 | ATGGTATTGGTAAGGAAAAAAAAAATGATAATAGAACGGTGTTACTCTGCAAGTGCAACATGTGCTAGTTTCTCTCCACCTTACATTATTAGAGATAACAACTTTAAACACCAACCATGTAACAAGTTTACTCTATGTTCAGCAACATCTTCATCTACATCTACTACCATATCTATAACTAAAAGAAGATCTTTATATGTGTCTCTCATCTGCACCACTTTATCTTCATTCATATTCTCACTTGCTCCTGCTTCATCCTCTTCTCTCTCTCCTTCCTCCAAGTTCCCCATATCAGAATTCTATGAGCTCCCCAATTCCAGTGGACTTAAGGTCTTAGACCTCCTTCTTGGTTCCGGTGATGAAGTTCCTTCTGACGGAGACAAGGTTGCAATACATTACTATGGTAGACTAGCAGCAAAACAAGGGTGGCGCTTTGATTCAACCTATGACCATAAAGATGAGAATGGTGATCCTAATCCCTTTGTCTTTGTTCTTGGGAGTGGCAAGGTTATAGATGGAATTGAGATGGCAGTGAGATCAATGAAAGTAGGTGGTATCCGAAGAGTCATCATACCTCCATCCCTTGGATATCAAAGCACATCACAGGAACCACTTCCACCCAATTTCTTTGACAGGCAGAGGCTGTTCACAACCATATTTAATCCAACTCGTCTTGCTAATGGAGAAGGCTCCACTTTAGGGACACTTATATTTGACATTGAACTGGTTAGCCTGAGGCATCAATGA | 747 | 0.407 | MVLVRKKKMIIERCYSASATCASFSPPYIIRDNNFKHQPCNKFTLCSATSSSTSTTISITKRRSLYVSLICTTLSSFIFSLAPASSSSLSPSSKFPISEFYELPNSSGLKVLDLLLGSGDEVPSDGDKVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIDGIEMAVRSMKVGGIRRVIIPPSLGYQSTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLRHQ | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip04g01500 | 248 | SUPERFAMILY | FKBP-like | 105 | 246 | - | - | |
| Aip04g01500 | 248 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC | 42 | 248 | IPR044197 | - | |
| Aip04g01500 | 248 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 120 | 243 | IPR001179 | GO:0003755 | |
| Aip04g01500 | 248 | Gene3D | - | 97 | 245 | IPR046357 | GO:0003755 | |
| Aip04g01500 | 248 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 126 | 246 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip04g01500 | Aip-Chr4 | 32680063 | 32682444 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip04g01500 | 121 | 246 | Calmodulin-binding Proteins | AT5G48570 | 33.071 | 9.48e-13 | 65.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip04g01500 | - | - | aip:107639245 | 455.292 |