Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01492 ATGGATGATCATAGGAGTGATCACAACTATAGGAATGATGGAGGAGAGGAATATGTGGAGGAGGCTGTGTTGCTTGAGGAGGAAGACTTTGCGAAAGGACTTCAAgaAAAGAAAATATCAGAAGGTGCAAAATCTGATGTTGCTTCTAAGATGAATGAGAAAGATGTTCTAAGTGTGTCTGAAGAGGCTTGGAAAGCAATCACAGCTGATAAACCAGGACTAGTTCTACAGGAAGTCCCTATGCTTATGAGGACTGCAATTTTCTTTGGAGGACATCCACCAATTTTGCGTGTTTCGCTAAATTACCGCATTGTTGCTGTTTGGTACAGGGTTGCCGGGGATGAAGATACCACTGGGGGCATGCCCATCGCCAATGAAGCAGAAATATCCAATGGAGCAGACCACAGAGTTGGATCGGTTGAGGGTGAAGGCTCTGTAGGGATGGAGTCGGACGAGTACGACTTTCAAGAAGATGAAATAGAACACGACCATCATGTAGAGGCCGATGTCGACAATGGGGATGTGGTTGAATTGGAAGACATTTTGGACGACGCCAGAGGAATGTCTGGCAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCTGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCAGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGTATTGATGGCTTCACCGTCTCCATCAATGGAAAGAAGAGTTGCCGGGGATGAAGATACCACTAGGGGCATGCCCGTCGCCGATGAAGCAGAAATATCCAACGGAGCAGACCACGGAGTTGGATCGGTTAAGGGCGAAGGCTCTGTAGGGATGGAGTCGGACGAGTACGACTTTCAAAAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGTGGTTGAATTGGAAGACATTTTGGACGACGCCAGAGGAATGTCTGGCAATTATGCGGAAGACGAGTTTTACGCTGTTGATTTCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGTACCATGGGTTCAGCGCGATACGTTCCAGAAGCGAAAAATGCGGCGTAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATACCTAACCGGCAAAAGAGGCCGAGGGCCGAGACATGGTGTGGATGCTCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTAA 1404 0.4772 MDDHRSDHNYRNDGGEEYVEEAVLLEEEDFAKGLQEKKISEGAKSDVASKMNEKDVLSVSEEAWKAITADKPGLVLQEVPMLMRTAIFFGGHPPILRVSLNYRIVAVWYRVAGDEDTTGGMPIANEAEISNGADHRVGSVEGEGSVGMESDEYDFQEDEIEHDHHVEADVDNGDVVELEDILDDARGMSGNYAEDEFYAVDSVESIGWIDFLNLSEEDVLRFNFADVDIAFEFYQQYAKHHGFSARRSRSEKRGVLMASPSPSMERRVAGDEDTTRGMPVADEAEISNGADHGVGSVKGEGSVGMESDEYDFQKDETEHDHHAEADVDNGDVVELEDILDDARGMSGNYAEDEFYAVDFVESIGWIDFLNLSEEDVLRFNFADVDIAFEFYQQYAKYHGFSAIRSRSEKCGVVRIRQEFVCHRQGYRSPKFYSIPNRQKRPRAETWCGCSARMLLRMDDESGRWHVA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01492 467 MobiDBLite consensus disorder prediction 283 302 - -
Aip04g01492 467 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 165 253 - -
Aip04g01492 467 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 320 466 - -
Aip04g01492 467 MobiDBLite consensus disorder prediction 250 276 - -
Aip04g01492 467 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 165 253 - -
Aip04g01492 467 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 320 466 - -
Aip04g01492 467 Pfam FAR1 DNA-binding domain 389 466 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01492 Aip-Chr4 32433108 32439983 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01492 FAR1 3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01492 - - adu:110279476 327.405