Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01490 ATGTTCGTACGTGCAAAGGAGGTGGAGGCTGATTTTGAGTGTGCAAAGAGTGACCCTGTTATGACCATCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGCGCAATGAGGGTGGTTGACTCTGAAGACAACGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCAAGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGTACCATGGCTTCGGCGCGAGACGTTCCAGAAATGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCTCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACATGGTGTGGATGCTCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGACTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCAAATCCACGATTTTATGGCAAGCCTAGCCGTCGGGTATCATAATGTCCCGTACACAACAAGGGAGATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGATAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTTTCCATAATAACCGACGATGACAGGCAAATGAAGTCTGCGATTGAGCAAGTTTTTCCAGAGGCTCACCATCGACTTTGCGCTTGGTATATACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTAGGGATTGCATGTTTGGCGACTACGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCATCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGGAAAAGTTCTTTGCCGAATTTCGAACAACATCAAGGTGCGAGGGCTTGCATGCTGTGA 1410 0.4986 MFVRAKEVEADFECAKSDPVMTINLKQLERSAAENYTRAIFYLFVPILDRACAMRVVDSEDNEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYAVDSVESIGWIDFLNLSKEDVLRFNFADVDIAFEFYQQYAKYHGFGARRSRNEKRGEVRIRQEFVCHRQGYRSSKFYSMPNRQKRPRAETWCGCSARMLLRMDDESGRWLVAYFSDAHNHHVLELRLSSMLPGHRRMSEADIEQMNDMRKGGIGVSQIHDFMASLAVGYHNVPYTTREMHNVNAKQRREGGLDAESCLRYLRECKINDPALYYKEVVDVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDDDRQMKSAIEQVFPEAHHRLCAWYILRNATSNIGKPKFTRMLGIACLATTRSEHSRESGLRWLRNLASPIKDGYRTCTREGTVGPQHTYGKSSLPNFEQHQGARACML 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01490 469 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 314 392 IPR031052 GO:0006355
Aip04g01490 469 Pfam FAR1 DNA-binding domain 128 217 IPR004330 -
Aip04g01490 469 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 115 312 IPR031052 GO:0006355
Aip04g01490 469 PANTHER OS02G0262500 PROTEIN 314 392 - -
Aip04g01490 469 Pfam MULE transposase domain 314 389 IPR018289 -
Aip04g01490 469 PANTHER OS02G0262500 PROTEIN 115 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01490 Aip-Chr4 32429171 32432127 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01490 FAR1 2.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01490 - - ahf:112770447 628.632