Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01485 ATGGCTGCTACTTCTGCTTCTTCCGCCGCAGCCGTTGCCGCTATCGCTGCCGCCACCGCTTGCATCGCACAATCTCTCTCTGTCATCCCTTGCATCGCACGAGATCCCTCCGCCGCCGCTCTCGTCGCGTCTACTCCCATCGTTGCAGAGCTCTCTCTGCCGCCGCTCTCATCGCATATGCTCCCTCTGGCGCCTCTTCCATCTAATCTCAACTCGCTCTCTCAGTTCTTCTCGGTGGCTAAGCAGCAGGGTTCTCTTGGTGACTTGACTGCATCTGTTGCATCAAACGCAGCTGCCCCAGCTCGTGCTCATCTACATGCCATAAGAATTGCTAGGTGCCAGTCTGATTCAGATTCAGATGAAGTTGTGGACACTACCACTGGAGAAGAGACAGAACTACTTGTTTCTTTGAAAAACGATGATTTGGAGGCTGTGGTGCGACAATCAAGTGAGGCAGCTGCATTGTTTGTCACTTCAGGAGGGATGAGAGCCATAGTTGAACTCTTAATCCCCCAACTGCAATTTTTAGATGATGAAGGTGCACAGGTAGAACTCTGGGAATTGTCAAGGATTTTCTTGGATACACTTATTGCAGAAACAGAATGTCAGGTCAAAGGAGAAACTAATATATCATATATATGTTCCCGGTTCTATTGCGCACCAGAACTCATATTTAGTGCTACTGAGTATACTACTTCAATTGATATTTGGTCAGCTGGTTGTGTCCTTGCTGAACTACTTTTGGGCCAGGTCCTTGGCACACCCACTCGAGAGGAAGTCCGCTGCATGAATCCAAACTACAACAACTTCAAGTTTCCACGGATAAAAGCACACCCATGGCACAAGCTAGAAGCTTGTGCACACCCATTCTTTGATGAACTCCGTGAACCCAATGCTCGCTTGCCAAATGGTCATCCATTTCCACCACTATTCAACTTTAAACAAGAGGCCAAGAAGGAAAAGCTGAAACAGAAGAGATGGAATGAGGATTATGTTAGCTATTATGAGAAGGTTAGAGCGTCAAGAAGTTCTAGTGCAGTTCCACTACCACCGCCACCGCCGCCACCCTCAATGTCTTTGGATGAAGACTATGATGATGATGAGGATGAAGATGACACTGAAGACTATAGCTAA 1134 0.4762 MAATSASSAAAVAAIAAATACIAQSLSVIPCIARDPSAAALVASTPIVAELSLPPLSSHMLPLAPLPSNLNSLSQFFSVAKQQGSLGDLTASVASNAAAPARAHLHAIRIARCQSDSDSDEVVDTTTGEETELLVSLKNDDLEAVVRQSSEAAALFVTSGGMRAIVELLIPQLQFLDDEGAQVELWELSRIFLDTLIAETECQVKGETNISYICSRFYCAPELIFSATEYTTSIDIWSAGCVLAELLLGQVLGTPTREEVRCMNPNYNNFKFPRIKAHPWHKLEACAHPFFDELREPNARLPNGHPFPPLFNFKQEAKKEKLKQKRWNEDYVSYYEKVRASRSSSAVPLPPPPPPPSMSLDEDYDDDEDEDDTEDYS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01485 377 Pfam Protein kinase domain 209 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01485 377 PANTHER SHAGGY-RELATED PROTEIN KINASE IOTA-RELATED 283 319 - -
Aip04g01485 377 SUPERFAMILY Protein kinase-like (PK-like) 205 296 IPR011009 -
Aip04g01485 377 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 203 283 - -
Aip04g01485 377 PANTHER SHAGGY-RELATED PROTEIN KINASE IOTA-RELATED 203 283 - -
Aip04g01485 377 Gene3D Transferase(Phosphotransferase) domain 1 187 332 - -
Aip04g01485 377 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 283 319 - -
Aip04g01485 377 MobiDBLite consensus disorder prediction 360 377 - -
Aip04g01485 377 MobiDBLite consensus disorder prediction 340 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01485 Aip-Chr4 32140835 32145304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01485 121 248 Core Cell Cycle Gene Families AT1G73690 26.573 1.65e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aip04g01485 Pkinase 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01485 K14502 - pda:103709954 194.126