Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip04g01483 | ATGGGTGCTTCAAATAACACATGTTCCATAAAAGGCCTTATAGTGGCCCTTTGCTTCCATCAAATGTTTAAAGGCATGGGTCTTGGCGGTTGCATTCTTCAGGTCCAATACAAGTTGTTAAAGAGGATGGTGTTAGTGCTGTTGTTCTCGATTACAACTCCATTTGGAATCGCATTAGGAATTGGATTGTCCAGAATCTACAAAGAGAACAACCCAAGTGCCCTAATCACAGTTAGTATGCTTAATGCTTCATCAGCTGGGCTTTTAATCTATATGGCATTGGTTGACCTTCTCTCTACTGATTTCATGAGTCCAAGGTTACAGAACAACATTAAGCTCCAATTCAAGTCTTACGTTGCTGTCTTTCTGGGTGTTGCTGGCATGTCTGTCATGACAAAATGGAATTAA | 408 | 0.4069 | MGASNNTCSIKGLIVALCFHQMFKGMGLGGCILQVQYKLLKRMVLVLLFSITTPFGIALGIGLSRIYKENNPSALITVSMLNASSAGLLIYMALVDLLSTDFMSPRLQNNIKLQFKSYVAVFLGVAGMSVMTKWN | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip04g01483 | 135 | PANTHER | ZINC/IRON TRANSPORTER | 2 | 134 | - | - | |
| Aip04g01483 | 135 | PANTHER | ZINC TRANSPORTER 3 | 2 | 134 | - | - | |
| Aip04g01483 | 135 | Pfam | ZIP Zinc transporter | 1 | 131 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip04g01483 | Aip-Chr4 | 32108380 | 32108787 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip04g01483 | 1 | 134 | Inorganic Solute Cotransporters | AT1G31260 | 66.418 | 1.96e-64 | 198 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip04g01483 | K14709 | - | ahf:112742496 | 265.388 |