Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01464 ATGAATACCTTTTCGATGGGGAAAGTGAAGCAGGCGGTGACAACGACAGCGATGAGGAGGAGGAAGAGGGAGATGCGGAGGGTGGCGGGCCATGAGAAGGCCATGTTGAAGAGCCTGCGACGCCAACGCCTGCTGCTGCTGCACTGGTCGTCGTTGAGATCCGACCAATCTTGCTTCAACGAAGAGCGAGCCCTCAATCCCACAAGGGTTTATGATTTCAGTTCATCTCTAGTTTTGAGATGCTTCAAAAAGGATGAGCATAATTGGAGAAAGAAAAAACATGGAAAAACCATGAAAGAAGCTCATGAAAAATTGAAGGGGTTGTGGCATTTTTCAATCAAATTTAGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGTCTATGGTTCAGAAAACCCTAACCTCCATCATGCCGCCATCTATCTCATCGTCGCCACCCTTCGCGCTCAAGATCGCAACCAAGTTCGTCGTTGTGTTAGGCAGCTCGCCATTCCTCTTGCTTTTTTGCTTGTCGTCCCTGTCGCCGTTCTGCTTGCCTCTCTCTCGTAGTTCTGCTCGCCTGTCAAGGCCTTCGCCGTCACTTCTCTCTTCGTCGGCAGCGCCGCCTCTGCCTCCGTCCTCATCCTCCGATCTAACGGCAATCACAAGATTAAATTTGAATGGCTTTTCCTTGAAAGGTTCAAAAATCCCTAACTTCCATCACGCCGCCATCTATCTCACCGTCGCCACCCTTCGCACTCAAGATCGCAACCAGGTTCGTCGTTGTGTTAGCCAGCTCGCAATTCCTCTTGTTGTTTTGCTTGTCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTGCCGTGAAGCTTCTAATGATGTTTCATTAACAAGTTTAGGTCAATGCAGCTCTCATAGGGTTTCTAGCCAAGATAATTCAAGCGAAAGCAAATTGAGGGATCTCCTCGACAGCTCGAAATACGTGCTTACCTTTGGGAGTCCTGACGGAAGGATCTTCTTGCCAGAGGGTCTCTTAGAGCGATCTACCATACTTGACTGGAGAAGTGCCCGGAGAGTATGTGGATTCTTCTCTAGCTTGTCCCTTTTGAATCACAAACATTGTGAAACTTTGAGTTGTTTTGCTTAA 1164 0.4562 MNTFSMGKVKQAVTTTAMRRRKREMRRVAGHEKAMLKSLRRQRLLLLHWSSLRSDQSCFNEERALNPTRVYDFSSSLVLRCFKKDEHNWRKKKHGKTMKEAHEKLKGLWHFSIKFRWEVLTCCIATMSMVQKTLTSIMPPSISSSPPFALKIATKFVVVLGSSPFLLLFCLSSLSPFCLPLSRSSARLSRPSPSLLSSSAAPPLPPSSSSDLTAITRLNLNGFSLKGSKIPNFHHAAIYLTVATLRTQDRNQVRRCVSQLAIPLVVLLVMXXXXXXXXXXXXXXXXXXXXXACREASNDVSLTSLGQCSSHRVSSQDNSSESKLRDLLDSSKYVLTFGSPDGRIFLPEGLLERSTILDWRSARRVCGFFSSLSLLNHKHCETLSCFA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01464 387 Coils Coil 270 270 - -
Aip04g01464 387 Pfam CG-1 domain 74 106 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01464 Aip-Chr4 30561325 30564925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01464 78 106 CAMTA Transcription Factor Family AT5G64220 82.759 7.37e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01464 K21596 - aip:110270662 57.3806