Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01460 ATGAAAGAGGGTGGTAGGAAGCAGGGTTCAGCCTCACCTTGTGCTGCATGCAAGCTTCTCCGCCGAAGGTGCGCCGTGGATTGCGTCTTTGCGCCGTATTTCCCGGCCGACGAGCCTCACAAGTTTGCAAATGTGCATAAGGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGCTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTTTATGGCTGTGTGGGAGCCATCTCTTCTCTTCAACAACAAATTGATGCGTTGCAAATCCAATTGGCTGTGGCTCAGGCTGAGGCTGTGCATCTCAGGGTGCGCCAGACTGCATCCTCCTCTTACTGGACCCAACCCCAAAGCCCAACCAATAGTGCCTCCCCACCCTCCAAGCCCATTTTTGACATCGACATGGGCCTTGACCATACCTCTTATGCAGATTCTATGTGGTCATGA 489 0.5276 MKEGGRKQGSASPCAACKLLRRRCAVDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQIQLAVAQAEAVHLRVRQTASSSYWTQPQSPTNSASPPSKPIFDIDMGLDHTSYADSMWS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01460 162 MobiDBLite consensus disorder prediction 124 141 - -
Aip04g01460 162 Coils Coil 92 119 - -
Aip04g01460 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 136 - -
Aip04g01460 162 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Aip04g01460 162 MobiDBLite consensus disorder prediction 124 144 - -
Aip04g01460 162 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Aip04g01460 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01460 Aip-Chr4 30438888 30442770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01460 1 162 AS2 family AT1G31320 69.591 2.12e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip04g01460 LOB 2.9e-43 No_clan