Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01450 ATGATGAAGCTGCGAATGGGAACGGGTGTCGTCGTCATTTCCACAGCGTTGTTATTTTTATGCCTCCCATTTTGTTCGTCTTCAGTTCCCAATGACCCCTTCTTCGGAATCGCTCCCCAAGATGAGAAATATTACAAGTCTTCGGATGTAATAAGATGCAACGATGGATCGGGAAAATTCACCAGAGCACAGCTCAATGACGATTTCTGCGACTGCCCCGATGGCACCGATGAGCCTGGTACATCAGCATGTCCCGGTGGAAAATTTTACTGTCATAATGCAGGGCATGTCCCTACTTCCCTGTTTTCGTCTAGGGTGAACGATGGAATTTGCGATTGCTGTGATGGAACTGATGAATATGATGGCAAAGTAACATGCCCAAATACCTGCTGGGAAGCTGGGAAAGTTGCTCGTGATAAGCTGAAAAAGAAGATTGCCACATATCAAGACGGTGTCAAGCTCCGGAAGGAAGAAATTGAAAAAGCAAAATCAGCTCTAGATAAGGACAAGGTTGAACTTTTAAAACTGAAAAAAGAAGAAAGCACACTTAAAGAGATTGTGCAACAGCTAAAAGagcataaagaagaaatagagaaggaagaagagaaggagCGCTTACGGAAGGAAAAAGAAGAGAAAGAGAAAAAGGAGGCTGAGGAGAAGGCTAATGAAGAAAAATCTGCAGCTACTGGAGAAGAAGCAGGGCATACAAATGAAGCAGGAAAGCATTCAGATGCCAAAGACTATGCTGCGGATGAAACGAAGTATGAGCAATCAGATGTAGGTGATAGTTATGATGGAGCCACAGATAGTCCTAGTAGTGAAGGATCTCCGCTTAATGAAGTGGAGGAGAGTGTAAAGGGTGCTGAGGGAGAACATGCTGCTAAATCAGAAACTGATTTGAGGGTTGAAGAGAAAAAATCTTCTGAGGAAATAATCAATACGGGAAATGATGCATCTGAAAATACTGAGGGATTATCAAAGGAAGAATTGGGTCAACTTGTTGCTTCTCGTTGGACAGGACAAAAGGGGGGTAAGCAAAGTGGTGAAGCTGAAGATGCAAAGAAAACTGAAGAACAGGAAGATCTCACAAGCGAGTCCAATAACGAGGAGTATGAAGGCTATGCTTCTGAAACTGACGATGACAGAAACAGATATGATGGAGAAGATGAAACCGAAGACGATTTTAGAGAGGATGAGCGTGATGACGTCAGTTCCTCTTACAAACCTGACGCAGATTTTGAAGGTGAACCAGACTTGTCAGATGTGGTGACAACAGATAGTCCTTCTTGGTTAACAAAAATACAGAGAACTGTGCGGAAACTTTTTAAGGCTGTTAATTTCTTCGAGACTCCGTTGAACCAGACAGATGCTGCTCGTGTACGAAAAGAATACGATGAGTTGAGTTCCAAGTTGTCAAAATTACAGTCAAGAGTATCAAGTCTGACACAAAAGTTAAAACATGATTTTGGTCCAGAGGGCGAGTTCTATTCATTCTATGACCGATGCTTTGAGAGTAAACAAAACAAGTACACTTACAAAGTCTGCCCTTATGATCAGGCTTCTCAGGAGGAGGGCTATTCAACTACCCGTTTGGGCCGCTGGGACAAATTTGAGGACTCCTATAAAGTAATGGCATTTTCCAATGGTGATAGATGCTGGAATGGTCCTGATAGAAGCATGAAGGTTAGGATGAGATGCGGGCTGAAAAATGAGATTACAGATGTGGATGAACCGAGCCGATGCGAATATGTAGCTTTGTTATCTACCCCAGCTCTTTGTAAAGAGGAAAAGTTGAAGGAATTACAACACAAGTTAGACTCGTTGAATTCGCAACAACCCGAAAAACACGACGAATTGTGA 1863 0.4192 MMKLRMGTGVVVISTALLFLCLPFCSSSVPNDPFFGIAPQDEKYYKSSDVIRCNDGSGKFTRAQLNDDFCDCPDGTDEPGTSACPGGKFYCHNAGHVPTSLFSSRVNDGICDCCDGTDEYDGKVTCPNTCWEAGKVARDKLKKKIATYQDGVKLRKEEIEKAKSALDKDKVELLKLKKEESTLKEIVQQLKEHKEEIEKEEEKERLRKEKEEKEKKEAEEKANEEKSAATGEEAGHTNEAGKHSDAKDYAADETKYEQSDVGDSYDGATDSPSSEGSPLNEVEESVKGAEGEHAAKSETDLRVEEKKSSEEIINTGNDASENTEGLSKEELGQLVASRWTGQKGGKQSGEAEDAKKTEEQEDLTSESNNEEYEGYASETDDDRNRYDGEDETEDDFREDERDDVSSSYKPDADFEGEPDLSDVVTTDSPSWLTKIQRTVRKLFKAVNFFETPLNQTDAARVRKEYDELSSKLSKLQSRVSSLTQKLKHDFGPEGEFYSFYDRCFESKQNKYTYKVCPYDQASQEEGYSTTRLGRWDKFEDSYKVMAFSNGDRCWNGPDRSMKVRMRCGLKNEITDVDEPSRCEYVALLSTPALCKEEKLKELQHKLDSLNSQQPEKHDEL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01450 620 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 16 620 IPR039794 -
Aip04g01450 620 Coils Coil 592 612 - -
Aip04g01450 620 Coils Coil 458 485 - -
Aip04g01450 620 Pfam Glucosidase II beta subunit-like 31 177 IPR028146 -
Aip04g01450 620 Coils Coil 159 229 - -
Aip04g01450 620 MobiDBLite consensus disorder prediction 193 260 - -
Aip04g01450 620 MobiDBLite consensus disorder prediction 348 363 - -
Aip04g01450 620 MobiDBLite consensus disorder prediction 285 312 - -
Aip04g01450 620 Gene3D - 496 594 IPR009011 -
Aip04g01450 620 SUPERFAMILY Mannose 6-phosphate receptor domain 506 594 IPR009011 -
Aip04g01450 620 MobiDBLite consensus disorder prediction 384 400 - -
Aip04g01450 620 ProSiteProfiles MRH domain profile. 501 596 IPR044865 -
Aip04g01450 620 MobiDBLite consensus disorder prediction 264 280 - -
Aip04g01450 620 MobiDBLite consensus disorder prediction 401 416 - -
Aip04g01450 620 Pfam Glucosidase II beta subunit-like protein 462 616 IPR036607 -
Aip04g01450 620 PANTHER BNACNNG14010D PROTEIN 16 620 - -
Aip04g01450 620 MobiDBLite consensus disorder prediction 193 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01450 Aip-Chr4 29581745 29589994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01450 26 620 Calmodulin-binding Proteins AT5G56360 53.895 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01450 K08288 - gmx:100807083 790.801