Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01446 ATGTCCACACACGAGCATGATGTTAAGACTGATTCTGATAATGATTTGGGTGATGATTTCGATTATAAATCGAATGCACACGATGAGGTTGAAGATGATGATGTTGATTTGTTGGATTCTACTAGCAAAAATGAACAAGATTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGAATAGAGGATGAGGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATGACATCGTGAAGGATAAGGAAAGTAAAATCATTTGCAGGCAACTTGTTTGCAATAAAGAGGGATGGAGGAATATGAGGTATCTTGATCTGGATAATAGATCAAGGGAGGCAAGGTCACTCATGCGAAACAAGTGTCCAGCTCGGCTTAAGGTAAAGGTTGACTACGACTGTGGTAGATGGAAGACGTGCCATATTATGGATATATTGCATTCTAGAAGGGTGGATATCATCATGCTGGCTTCACACGCAAAAGATTTGTACAACCACATTTATCATTATCGTAGATCAAAAGTAAAAAACGGGGATGCCAATGCAGCAATAAACTATTTGATTGGGAAGTCAAACAACGATCCGCTGTTCTTTAGGAAGTATACATTCACTAGTGACGAAAGGCTCGAGCATATATTTTGGGCAGACGGGCAATCAATTGTCGACTATCACTACTTTGGAGATATTGTTGCCTTTGATTCAAAGTACAAGAAGAATAAATATAACAAACCTTTGGTCATTTTCTCCGGATGCAATCATGGGAAGACTGTTATTTTCAGTTCCGGTCTACTATCGGACGAAACCATAGACACGTATAAGTGGTTGTTAGAAACATTTGTTGAAGCGATGGGTGGGAAGCGTCATAAAGAAGTTATAACCGATGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCTCGATGTGACCCATCGGTTATGCGGGTGGCATCTTCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTACGGGATTTTAAGGGTCTTATATATGACAACAACGACTGTAGAGATTTTGATCGAAGATGGGTAGACATTTTGGAGAAGCACAACCTTGTTGAGAATACGTGGATGGAAAAGACTTACGAAACTCGTGCGATGTGGTCCCATTGTTTCTTACGGGATAAGTTTTTCTGGTACATAAGGATGACGTCACAGTGTGAAGGTATAAACTCTCTCATCAGATTTTACATTAATCGTAAGAATACTCTCATCGACTTCATACATAACCTGGATATGGCCTTAAAGGACTATAGAAACAATGAATTAATAGCTGACTTTAAGTCTCAGTGCTCTGAGCCAGTGATGATAACTTTGTTGGAGTGTGACTACTCTCGGAGACCTGGCCAAAGATCGACGGTGGAAGTCGATAGAAGTAAAAATCTGTTCTCATGCTCGTGGAAGCTATTTGAATCACGCAGCATTCCCTATAGTCACATTTTCTGTGCCATGAAGTTCGAAAACCTCCTTGAGTTTCCAGAGTCTTTGATCTACAAAAGGTGGACTAAGAATATGAAGAATAATTTTATTAGCACAATAACGCCTGTGAACGACGACGTTGAAAGGGTCTTAAAGTTTCAAGTTGGTGCATTGGCATCCAATTGCAACAAACTGTGTGATATTGCTTGTAAAAACGTTGCTGACTTTGACGAAGTCCAATCTGAACTTGTGAAGCTAATTATTTACTTCCAGTCACGCAAACACAGGACGTCCACTCCAAATCCGAACGTGGGAGGCATCAATGATCCCTTTGTTGTCAAAAGTAAAGGAGCCCTTTGCAAGAGGTCTTCATGGAGGAAGAAGAGAGTATGCTCTAATTACCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGAGAAAGCCACCTTCAAGCTCCAGAACGCGTGCCAGTCCCCGCCACTGTCGCCGCCGACAGTGACAGCCCTCTCGAAGGTCTGCTCGGCCCTCTCGAAGGTCAAGCCAGTTGTCATCGTCGGCCTTGAGTTGCAGATTTTTTTTGTTTTTGTTAAGTTTGGTTCATTTATGGCTCTCACCGGCGCGCTTCAACTCAGTCGTGGACTTCTCTCATCGCCGTCGCTCACGCACGTTCGCTTCTCGTCGGCGTTTCTCTGCTTTGTCTCTGTTCTCTCTCTCTTTCTCGTAGCTCAGCTACTGTTACCGTTGGGCTGGATTGTTGTTTTCTGCTCTGATTTGATACTGAAAGAAGAGTTTTCAGTTGAAATCCCAGATGAGAAAACTGATAAGCTTGCTCGCCGTGTCAATGTGGCGAAATACATAGCCTCAAAATACATAGCCTCACCTAAAGCGGACTAG 2400 0.4213 MSTHEHDVKTDSDNDLGDDFDYKSNAHDEVEDDDVDLLDSTSKNEQDCGVKRIADLMVEDIWNLEFRIEDEACQFYNAYACWHGFVMRKDDIVKDKESKIICRQLVCNKEGWRNMRYLDLDNRSREARSLMRNKCPARLKVKVDYDCGRWKTCHIMDILHSRRVDIIMLASHAKDLYNHIYHYRRSKVKNGDANAAINYLIGKSNNDPLFFRKYTFTSDERLEHIFWADGQSIVDYHYFGDIVAFDSKYKKNKYNKPLVIFSGCNHGKTVIFSSGLLSDETIDTYKWLLETFVEAMGGKRHKEVITDGDLAMRDAIKNVLLDVTHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDCRDFDRRWVDILEKHNLVENTWMEKTYETRAMWSHCFLRDKFFWYIRMTSQCEGINSLIRFYINRKNTLIDFIHNLDMALKDYRNNELIADFKSQCSEPVMITLLECDYSRRPGQRSTVEVDRSKNLFSCSWKLFESRSIPYSHIFCAMKFENLLEFPESLIYKRWTKNMKNNFISTITPVNDDVERVLKFQVGALASNCNKLCDIACKNVADFDEVQSELVKLIIYFQSRKHRTSTPNPNVGGINDPFVVKSKGALCKRSSWRKKRVCSNYHKYGHYYKRCPDLMQHSEKATFKLQNACQSPPLSPPTVTALSKVCSALSKVKPVVIVGLELQIFFVFVKFGSFMALTGALQLSRGLLSSPSLTHVRFSSAFLCFVSVLSLFLVAQLLLPLGWIVVFCSDLILKEEFSVEIPDEKTDKLARRVNVAKYIASKYIASPKAD 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01446 799 MobiDBLite consensus disorder prediction 1 30 - -
Aip04g01446 799 MobiDBLite consensus disorder prediction 1 41 - -
Aip04g01446 799 PANTHER OS02G0262500 PROTEIN 143 457 - -
Aip04g01446 799 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 150 IPR031052 GO:0006355
Aip04g01446 799 Pfam FAR1 DNA-binding domain 74 154 IPR004330 -
Aip04g01446 799 PANTHER OS02G0262500 PROTEIN 60 150 - -
Aip04g01446 799 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 457 IPR031052 GO:0006355
Aip04g01446 799 Pfam MULE transposase domain 242 335 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01446 Aip-Chr4 29517271 29521489 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01446 MULE 1.3e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01446 - - ahf:112755379 1040.02