Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01421 ATGTGCAAGTTCATTGACATGTATAGTTTTGCAGATGCGTTTGGTGAGAATGGAAGACCAGCATCAGGTGATGAAGGTGCTATACCTCCGAATGCTTCGCTCCAAATTGATCTTGAGTTGATATCTTGGAAGGCTGTATCTGACATAACCAAGGATAATAAGGTTCTCAAGAAGACCTTGAAGGAGGGAGAGGGGTATGAACGTCCCAATGATGGAGCTGCGGTTCAAGTGAAACTTATTGGTAAGCTGCAAGATGGGACTATTTTCGTGAAGAAGGGTCATGATGATGAGCATCCATTTGAGTTCAAAATTGACGAGGAGCAAGTAATTAATGGACTTGATAAAGCTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCCTCCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGAAAAGGAATCGTGGGATCTGAATACACCAGAGAAGATAGAGGCAGTTGGAAAGAAGAAGAAAGAAGGGAATGCACTGTTCAAGGCTGGCAAATATGAAAGAGCATCAAAGAGATATGAAAAGAAGTTAACCCCAATTCGCGACTTTTCCATTTCACCTCTACCATTTCACCAACCCTCCCTCTCGATGCCGCCGCGCCTCTTCGCTCTGCTGCCACCGTGTCGTTACTCTGCTGCTCCAACACCCGTCGTCGCCCCGTCGCACTCGCGCCGCCATCCCTCCGTCCCCTGTTTCAAATCGAAACACGTCGTATCAATAAGCGTTTCAGGGATGTCAATTATCGAAGAAGATATGCAGACTCTCGATGATTCTCGCTCGATCTACGTCTTCCTCTCTTCGAGTCTCAAATGGAATTCTTTCTATCAAAACCACGAGTCTAATGTATACAGCTTTGGAGTAATATTATGGGAACCTGCAGCCGAAAAGATCCCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCCGTGGGGTTCATGGATCAGCGACTTGAAATTCCAAAAGATGTTGATCACGATGGGCTTCTATAA 1086 0.4549 MCKFIDMYSFADAFGENGRPASGDEGAIPPNASLQIDLELISWKAVSDITKDNKVLKKTLKEGEGYERPNDGAAVQVKLIGKLQDGTIFVKKGHDDEHPFEFKIDEEQVINGLDKAVMNMKKGEVALVTIHPEYAFGSSGSTQELATVPPNSNVYYEVELVSFVKEKESWDLNTPEKIEAVGKKKKEGNALFKAGKYERASKRYEKKLTPIRDFSISPLPFHQPSLSMPPRLFALLPPCRYSAAPTPVVAPSHSRRHPSVPCFKSKHVVSISVSGMSIIEEDMQTLDDSRSIYVFLSSSLKWNSFYQNHESNVYSFGVILWEPAAEKIPWDNLNSMQVIGAVGFMDQRLEIPKDVDHDGLL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01421 361 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 13 44 IPR001179 GO:0003755
Aip04g01421 361 SUPERFAMILY FKBP-like 46 181 - -
Aip04g01421 361 Gene3D Tetratricopeptide repeat domain 166 225 IPR011990 GO:0005515
Aip04g01421 361 Gene3D - 45 165 IPR046357 GO:0003755
Aip04g01421 361 PANTHER PEPTIDYLPROLYL ISOMERASE 164 211 - -
Aip04g01421 361 Gene3D Transferase(Phosphotransferase) domain 1 265 360 - -
Aip04g01421 361 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 66 161 IPR001179 GO:0003755
Aip04g01421 361 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 72 164 IPR001179 GO:0003755
Aip04g01421 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 57 164 - -
Aip04g01421 361 PANTHER PEPTIDYLPROLYL ISOMERASE 13 90 - -
Aip04g01421 361 PANTHER PEPTIDYLPROLYL ISOMERASE 57 164 - -
Aip04g01421 361 SUPERFAMILY Protein kinase-like (PK-like) 305 356 IPR011009 -
Aip04g01421 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 13 90 - -
Aip04g01421 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 164 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01421 Aip-Chr4 28124825 28129116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01421 13 211 Calmodulin-binding Proteins AT5G48570 76.238 3.28e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01421 K09571 - gmx:100819747 339.732