Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01412 ATGAGGTTGGTGGAGTTTTGGTGTATATTTATAATAATTATATTGGCCAATATTCTTGAACCTGGGAAGGCAGAGGTTTATATAGTAACCGTTGAAGGTGAGCCTATCATAAGTTACACCGGCGGTATCGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATCGATACCACAAGTGAATTGGTCACTTCTTATGCACGCCACCTTGAGAAAAGACATGATATGCTACTTGAAATGTTGTTTGATGCTGGGACGTACACAAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTGCATCTTTCCCCAGAGCAGGCAGAAACTCTTAGACATGCTCCTGGTGTTAAATCTGTTGTGAGGGACTGGAAAGTGAAGAGACTTACAACACATACACCACAATTTTTGGGGCTTCCAACTGGAGTGTGGCCGACAGGAGGTGGCTATGATCGAGCCGGAGAAAACATAGTGATTGGATTTGTGGACTCTGGGATATATCCTCACCATCCCAGCTTTGTCACTTATAATACTGAACCATATGGGCCACTTCCAACGTATAGAGGAAAATGTGAAGTTGACCCGGAGACTAAGAGAAGTTTCTGTAATGGGAAGATTATAGGAGCACAGCATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTATAGTTGATTTTGCTTCTCCTTTGGACGGGGATGGGCATGGAAGTCATACTGCCTCTATTGCGGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGAGGTTTCATTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGGGTTGATATACTCAGCCTTTCTGTTGGACCCAACAGTCCTCCAGCAACCACCAAAACCACTTATTTAAACCCATTTGATGCTACGCTTCTTGGAGCTGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCCGGAAATGGTGGCCCCTTTCCTAAGACTTTAGTTTCGTATAGTCCATGGATAGCATCCGTAGCTGCAGCAATTGATGATCGTAGATATAAAAATCATCTGACTCTTGGAGATGGTAAAATCTTGGCTGGAATTGGTCTATCACCTTCTACACATTTTAACCAATCATACACATTAGTTGCTGCAAATGATGTTGTGCTAGACTCCTCAGTTATGAAGTACAATCCCACGGATTGCCAGAGACCTGAACTTCTAAACAAGAACTTGATAAAGGGGAACATTCTTCTTTGTGGTTATTCTTTCAACTTTGTAGTTGGTTCTGCATCAATAAAAAAGGTTTCAGAAACAGCGAAGTCTCTTGGTGCAGCTGGATTTGTTCTCTGTGTTGAAACTGTTTCTCCTGGAGCAAAATTTGATCCAATCATCTTTGTATTCGTCCTTATTGGCATTCCTAGTATTGTTATCGCAGATGTCAGCAAGTCAAAGGAACTAATAGATTATTATAAAATCTCCACTCCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAAGGTACTGGAAAAATTGGGGATGGTTTGATGCCTATTCTTCATAAGTCTGCACCACAGGTGGCTTTATTCTCTGCAAGAGGACCAAATATAAAGGACTTTAATTTCCAAGAGGCAGATCTTCTCAAGCCAGATATATTGGCACCGGGATCATTAATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAACCAAATTATATTGCAGGAGAGGGATTTGCCATGATATCTGGAACTAGCATGGCTGCTCCACATATAGCCGGCATTGCGGCTCTCATAAAGCAGAAACATCCACATTGGAGCCCTGCCGCCATCAAATCAGCCTTGATGACGACATCAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAAACACAGGCGATGAAGCTAGTAAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTAATCCAAGAGATGCTTTGGACCCTGGGCTAATCTTTGATGCAGGATACAATGATTATCTAGGGTTCTTGTGCACAACACCCGGCATCGACATTCATGAGATAAAGAATTATACAAACACACCATGCAACAACACAATGGGCAACCCAGCAAATCTAAACAGTCCTTCCGTTACAGTCTCCCATCTAGTAAGAACTCGAGTTGTCACCCGAACCGTCACAAATGTTGCAGGGGAAGAAGAAACATATGTGAATACAGCTAGAATGGACCCTGCAGTTGCCATTGAAGTCAATCCTCCAGCAATGACCATCAGACCAGGCGCATCGCGTAAGTTTACCGTGACACTAACAGTTCGGTCAGTGACCGGAACCTATAGCTTTGGTGAGGTTTTGATGAAAGGGAGCAGAGGTCACAAGGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG 2481 0.4341 MRLVEFWCIFIIIILANILEPGKAEVYIVTVEGEPIISYTGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMLLEMLFDAGTYTKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVVRDWKVKRLTTHTPQFLGLPTGVWPTGGGYDRAGENIVIGFVDSGIYPHHPSFVTYNTEPYGPLPTYRGKCEVDPETKRSFCNGKIIGAQHFAQAAIAAGAFNPIVDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGDGKILAGIGLSPSTHFNQSYTLVAANDVVLDSSVMKYNPTDCQRPELLNKNLIKGNILLCGYSFNFVVGSASIKKVSETAKSLGAAGFVLCVETVSPGAKFDPIIFVFVLIGIPSIVIADVSKSKELIDYYKISTPRDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFNFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYIAGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSETQAMKLVKATPFDYGSGHVNPRDALDPGLIFDAGYNDYLGFLCTTPGIDIHEIKNYTNTPCNNTMGNPANLNSPSVTVSHLVRTRVVTRTVTNVAGEEETYVNTARMDPAVAIEVNPPAMTIRPGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01412 826 Gene3D Peptidase S8/S53 domain 158 695 IPR036852 GO:0004252|GO:0006508
Aip04g01412 826 PANTHER CUCUMISIN-RELATED 16 825 - -
Aip04g01412 826 SUPERFAMILY Protease propeptides/inhibitors 86 128 - -
Aip04g01412 826 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Aip04g01412 826 PRINTS Subtilisin serine protease family (S8) signature 604 620 IPR015500 -
Aip04g01412 826 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Aip04g01412 826 CDD Peptidases_S8_3 132 641 IPR034197 -
Aip04g01412 826 Gene3D - 699 823 - -
Aip04g01412 826 ProSitePatterns Serine proteases, subtilase family, serine active site. 605 615 IPR023828 -
Aip04g01412 826 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 130 IPR037045 -
Aip04g01412 826 Pfam Fibronectin type-III domain 727 820 IPR041469 -
Aip04g01412 826 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 825 IPR045051 -
Aip04g01412 826 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Aip04g01412 826 ProSiteProfiles Serine proteases, subtilase domain profile. 125 682 - -
Aip04g01412 826 CDD PA_subtilisin_like 378 521 - -
Aip04g01412 826 Pfam Subtilase family 156 647 IPR000209 GO:0006508|GO:0008236
Aip04g01412 826 Gene3D - 371 541 - -
Aip04g01412 826 SUPERFAMILY Subtilisin-like 131 686 IPR036852 GO:0004252|GO:0006508
Aip04g01412 826 Pfam Peptidase inhibitor I9 26 129 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01412 Aip-Chr4 27744986 27751307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01412 3 826 Subtilisin-like Serine Gene Family AT4G30020 78.909 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01412 - - gmx:100784999 1422.53