Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01411 ATGGAGGAATGTGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGGTGTACGCAAGGAAGACTATGGGAAGAATGACGACGGAAACCTAATTAGGAGGAGATTCTTTTGCAACAAAGCTGGATTAAGGGATGAAAAGCACTATAACAAATATGATAGAAAAAGATGTCATAAGCTTGAGACGCGGACGAATTGCCAGGCTAAGTTGTCCATATATCTTGACAAAGAAAGTTCGAATTGGAAGGTCCGAAAAGTCATCCTTGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCTAAGTTCTGTCGGGTTTCAGGTGCGGCAAAGGATCAGCTAGATGGTATGCAAAGTCATGGGCTACCAACGTCAAAGATACTTGGTTACATGGAGGGGATTGCTGGAGGGTATTCACTATTGGTTTTCACAAAGATGAATGCTTATAACTACTTTGACCGGACTAAGCGTGCAAGAATCGCAGATGGGGACGCAAATTCTGCCATTGTTTATTTGGAGGGAAAGGCTTCTGTGGACCCGATGGCAATGGCGAGGTATAACCTGATTAAGGAGGAACTGGTTCTAAAGTGGATGTTGTTCGGATTTTTGAAAATCCAAAGCATGCCCACCCCTAGTGGTTATATGTGTCACATTCGTTTTCTTGGTGATTCATTGTTGGTTGCAAAGGGTAGCACTGCTCAGGTTAATAGGGACGAAGGCATAGAAGCCGCTTGTGAGTTCGATCGCGTCATCGGAACAGGGGAAAGCGAGACTATTAAGGCCAAAGCGTGCAAGCCAAAGGGGAATTGGGCCTTTGAGGTGCTGGACCTCCTTCGGTCACTCCACGCACACGTTAAGTACAAATGA 882 0.449 MEECAYEFYMRFGKCHGFGVRKEDYGKNDDGNLIRRRFFCNKAGLRDEKHYNKYDRKRCHKLETRTNCQAKLSIYLDKESSNWKVRKVILEHNHELVARCMVHLIPKFCRVSGAAKDQLDGMQSHGLPTSKILGYMEGIAGGYSLLVFTKMNAYNYFDRTKRARIADGDANSAIVYLEGKASVDPMAMARYNLIKEELVLKWMLFGFLKIQSMPTPSGYMCHIRFLGDSLLVAKGSTAQVNRDEGIEAACEFDRVIGTGESETIKAKACKPKGNWAFEVLDLLRSLHAHVKYK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01411 293 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 105 - -
Aip04g01411 293 Pfam FAR1 DNA-binding domain 7 97 IPR004330 -
Aip04g01411 293 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01411 Aip-Chr4 27648402 27649693 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01411 FAR1 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01411 - - aip:107633916 286.189