Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01384 ATGGGAACAAGTCACTCGGAATCGAACAAAGAATCGCATCGCTCACAGGGGGATGTTCACGGCAATATGCCTGTGTTAGTTATCGCTGAGGACTTCTTGCATACAGTTTTCACTTCTGAGGAGGAGGCCTACAATGCTTACAAGGAGTTTGCCTGGACATGGGGGTTTGGTGTTCGCAAGGGGGATGTGGGATGGGTTGACGGTGTTTTGGTGAGGCAGGACTTCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATCAGCCAGAACGAGTAAGGGAGGAGCGGCTAGAGAGTCGCACAGACTGCAAGGAGAAATTGAAAATATACTATGATGTCCATGATAATGTGTAG 360 0.4889 MGTSHSESNKESHRSQGDVHGNMPVLVIAEDFLHTVFTSEEEAYNAYKEFAWTWGFGVRKGDVGWVDGVLVRQDFFCHRQGTRSDKHYDQPERVREERLESRTDCKEKLKIYYDVHDNV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01384 119 Pfam FAR1 DNA-binding domain 47 113 IPR004330 -
Aip04g01384 119 MobiDBLite consensus disorder prediction 1 21 - -
Aip04g01384 119 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 7 115 - -
Aip04g01384 119 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 115 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01384 Aip-Chr4 26901100 26901459 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01384 FAR1 2.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01384 - - adu:107478961 233.032