Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01355 ATGGCCAAGAACTTTGTATTTGTGTTCACATCATTTATGATTCTACTAATTAGTAGTGTACAAACAAGCTCTGCTCAACTTTCTCGCGGCTTCTACAACAACACATGCCCCAATGTGGAACAGCTGGTTCGCGCCGCCGTGACGCAGAAGTTGCAGCAGACATTTGTGACTGCTCCTTCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTCAGGGGTTGTGATGCTTCAGTTCTGCTTGTGTCTCCAACTAACCAGGCAGAGAAAAACCATCCTGATGACGTGTCGCTTGCCGGGGACGGTTTCGACACGGTGGTTAAGGCCAAGGTAGCCGTTGATAGTGATCCTCAGTGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTCTGGCCACTAGGGATGTGGTCAACTTGGCTGGGGAACCATTTTATGAAGTTGAATTAGGAAGGCGTGATGGGAGAATATCTACTATGCAAATCAGTAACATTGCAAGTTTATGGTTTATTTCTCTCTTCCTTTCCATCTTTGCAACCGGAATTCTCGAGATGAGGTGGAGTGGAGTAGGAATCGACGAGTGGTGGAGGAACGAACAATTTTGGGTCATCGGTGGTGTTTCATCTCATCTTTTTGCTGTGCTCCAAGGCTTACTCAAAGTGCTGGCTGGTATTGACCCCAACTTCACCGTTACCTCCAAGGCATCAGACGACGACGGGGACTTCGCTGAACTCTACATGTTCAAATGGACAACACTTCTCATTCCGCCGACAACGCTTCTCATAGTGAACTTGGTTGGCGTCGTAGCTGGCATCTCCTACGCCATCAACAGTGGTTACCAATCATGGGGTCCCCTCTTTGGTAAACTCTTCTTTGCATTCTGGGTGATCATCCATTTGTACCCTTTCCTCAAAGGTCTCATGGGTCGCCAGAATCGAACGCCGACCATTGTGGTGGTTTGGTCCATTCTTCTTGCATCCATTTTTTCTCTTTTATGGGTGAGAGTTGATCCATTCACCACAAGAGTCACTGGTCCTGATGCTGAGATATGTGGCATAAACTGCTAG 1062 0.4736 MAKNFVFVFTSFMILLISSVQTSSAQLSRGFYNNTCPNVEQLVRAAVTQKLQQTFVTAPSTLRLFFHDCFVRGCDASVLLVSPTNQAEKNHPDDVSLAGDGFDTVVKAKVAVDSDPQCRNKVSCADILALATRDVVNLAGEPFYEVELGRRDGRISTMQISNIASLWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVLQGLLKVLAGIDPNFTVTSKASDDDGDFAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDAEICGINC 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01355 353 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 158 353 - -
Aip04g01355 353 PANTHER CELLULOSE SYNTHASE 158 353 - -
Aip04g01355 353 SUPERFAMILY Heme-dependent peroxidases 26 160 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 Pfam Cellulose synthase 156 347 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip04g01355 353 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Aip04g01355 353 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 Pfam Peroxidase 44 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01355 353 Gene3D - 27 171 - -
Aip04g01355 353 ProSiteProfiles Plant heme peroxidase family profile. 26 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01355 Aip-Chr4 25008917 25011269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01355 159 353 Glycosyltransferase AT5G05170 91.795 9.39e-124 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01355 K10999 - tcc:18614625 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03302 01 136132215 136134707 Aip04g01355 04 25008917 25011269 PCT