Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01351 ATGGAGGGGCAAGCAGCTAAGCGGAGGCGCGTGTACTCGATTGAACCCAAGAAAGTGGTAGAAGAAGCAGTGTTTACAAGGAATTACATGAACTATTTGGTTCCGGCATTGATGAAGATCAAGGCGGGAAAAAGGAGTAGCCATTGTTGTGAGATTCAGAATGTTGTGAAGCATGAAGTGGACATGGCAATGGTGTTCTCGGCACAAGGTTTTGCCTGGAGTAATGCTCTAAAAGCCAACCTTCAAAGGTACCAAAATGAACATAGTAGTAGTAGTGGTGGTCCAATAATAACTAGTAATAACCCTAGTAATAGTAGTTCAAAGTCCATCAAGTATGTTAATAAGGACATAAAAGGAGAAGAATATGAAGATGGGTTTATCAATAATAATAATAATAATAATAATAATAATAGCAAATTGAGGTGCTTAAGAAGGTTGATACCCGGTGGAGAAGATATGTGCAATGAACAAATGGTTGAAGAATTAGAGAGCTATATAAGCTGTTTGAAAATGCAGGTCAATGTTCTTCAATACCTTGCAGACAAAAATTGTTGA 555 0.3784 MEGQAAKRRRVYSIEPKKVVEEAVFTRNYMNYLVPALMKIKAGKRSSHCCEIQNVVKHEVDMAMVFSAQGFAWSNALKANLQRYQNEHSSSSGGPIITSNNPSNSSSKSIKYVNKDIKGEEYEDGFINNNNNNNNNNSKLRCLRRLIPGGEDMCNEQMVEELESYISCLKMQVNVLQYLADKNC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01351 184 PANTHER TRANSCRIPTION FACTOR BHLH146 3 182 - -
Aip04g01351 184 CDD bHLH_AtIBH1_like 139 180 IPR044549 GO:0006355
Aip04g01351 184 MobiDBLite consensus disorder prediction 86 109 - -
Aip04g01351 184 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 182 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01351 Aip-Chr4 24855602 24856501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01351 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 37.640 6.35e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01351 - - lja:Lj6g3v1358590.1 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03299 01 136106063 136106723 Aip04g01351 04 24855602 24856501 PCT